Protein

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Genbank accession
YP_009292881.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,68
Protein sequence
MAVEFDPHQNIAGNLIRDLAVAVIGTKYRMLVPSNGPFYSHSLVVKSGSTVLKLGGDYLITHPYMTGTLRTGRSVHGMIWIVNPKYTSSFTITAHYVGKGEATTAQINAERAANANKFPSDCQWEDVIGDVYFPPVDIQFDWDNWKGERELMQAIVEIGKKITELPPIPDPMANNTAVRVANDFIEPRFTYDNSAGFITNQVNSDQYAILSSSNYALSDFKFQATYNLPSYVSASTAPYWWMTIIGYWGSPFRNATLELLNGDTFRFLITYDSFDKQESFVWATKTVDANFFKKPFTVTIDRKRSARTVELTITQDGVIVLHSLMDMNNPPAAFAARFIQLGIAVTLDRGTDFRFRHISSVGDSIKFSALPGATIEIPDGSDVLTLLKKYHSLVDKLYRESPAHAHILRKDNPHGDQSYGRMRAIELNGIADDATLAYGKSQAQLADYVNQRSAKATDFSDKMLRKSATPRTITGTFTMLPGLSSITSAKDTEASGVGTNLQVDDKVVRLIARDSSTISAGSQPITFNAGANVMVLYPDARELQWNGKKILDPTTVAPYLPGNEGGGSGIFYATPTATMTVSGSGIQSMPFIFTWVAPDDTDNAALALRMLTTEFGNSESLAATPALIQKLANEFTGKLEQAKAYINGLSLMSSVSLDKTSFNLDAVENIADLSLPTSSLQRQEMAKYAKNGHTHDASAFGIGDATTAKAGLVQFGGLVNDATLALEGQYVATQYDTVEKLEATVGNSDTEAIIDILRFGASGNNEVMNGGSFNGWMVVLNPNNYFVKKDYAVPTATFNLSELFPVNHEDTVIGVYVDIVGDTAQYVLKDSINFAETDTLTRIGEIYTDETQISGLSIRNTTRLGNFRELEEHAADVSAHIPRAMTQAQFGYTFTNDGPTWNNGVPGTRRFDGDWRMLKGPDYVPMENVDWPSSTSLLLKKTGTGVANHRHLVHQCPIKKSGNIVAAFSSSDVTASNVFEVVLASWKDSKERRNRISLLIQRTNNITGSEGTLCYLGFAINYGTNRQVLIGINASSFTTANDWQNMAASVTFNLDHNASGALQITGGVNVNPLGFTFSVDLVGKRVTFWRTYGAAAVTEAYDLAPYLTAAQVDISPLVSVPTWPVYHGIGGTLASDATVALTYDMGNFAPRPGYDTAFDYIHTLSEMNRIRVITAPSASKLSNADVRTAAAAKDMATAAKRPDGVPDYLNKDRLATYSDGVNYTAVVVRD
Physico‐chemical
properties
protein length:1230 AA
molecular weight: 134147,21800 Da
isoelectric point:5,54126
aromaticity:0,09675
hydropathy:-0,17528

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009292881.1
1 1230
Domain Start End Length (AA) Confidence
N-terminal 1 179 179 0,9879
Central domain 180 846 668 0,2385
C-terminal 847 1230 383 0,5629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-179
Central
180-846
C-terminal
847-1230

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_ChrisDB
[NCBI] 		1883371 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009292881.1 [NCBI]
Genbank nucleotide accession
NC_031126 [NCBI]
CDS location
range 156761 -> 160453
strand -
CDS
ATGGCAGTCGAATTTGACCCGCATCAGAATATAGCGGGGAACTTAATCCGCGATTTAGCGGTTGCGGTTATCGGCACCAAGTACCGAATGCTGGTACCTTCTAACGGCCCTTTTTACTCCCATTCTCTGGTCGTGAAGAGCGGCTCTACCGTTTTAAAGCTCGGCGGTGACTATCTTATCACCCATCCATACATGACCGGAACGTTGCGCACTGGACGGTCTGTGCACGGGATGATTTGGATTGTAAACCCGAAATACACCTCGAGCTTCACAATCACTGCCCATTACGTCGGCAAAGGGGAAGCAACTACCGCACAGATCAATGCTGAGCGAGCAGCGAATGCCAATAAATTCCCAAGTGACTGTCAATGGGAAGATGTAATCGGTGATGTTTATTTCCCGCCAGTAGATATTCAGTTTGACTGGGATAACTGGAAAGGTGAACGTGAGTTAATGCAGGCTATCGTTGAAATCGGTAAAAAGATAACGGAACTTCCGCCTATCCCCGACCCGATGGCGAACAACACTGCGGTTAGGGTCGCCAACGACTTTATCGAGCCTAGATTCACGTATGATAATTCGGCTGGATTTATTACCAATCAGGTAAATTCCGATCAGTATGCGATATTATCCTCCAGTAATTACGCCTTATCTGATTTTAAATTCCAGGCAACGTATAACCTACCGAGTTATGTGTCTGCATCCACCGCCCCGTATTGGTGGATGACTATAATTGGATATTGGGGAAGCCCTTTTCGTAATGCCACGCTGGAGTTATTAAACGGCGACACCTTCCGTTTTCTTATCACTTACGATTCCTTTGATAAACAAGAGTCGTTTGTTTGGGCCACGAAGACGGTCGATGCTAACTTCTTCAAGAAACCATTTACGGTAACTATAGATCGTAAACGGTCGGCTAGAACAGTCGAGTTAACCATTACGCAGGACGGGGTGATTGTACTTCACTCGTTGATGGATATGAATAACCCCCCTGCCGCATTCGCCGCACGATTCATACAGTTAGGAATTGCCGTAACATTAGACCGCGGTACCGATTTCCGGTTTAGGCATATTAGCAGCGTAGGAGATAGTATCAAGTTTTCTGCTTTGCCGGGCGCTACAATTGAAATCCCCGACGGTTCTGATGTATTAACGTTACTGAAGAAATATCACAGTCTCGTTGATAAACTATATCGCGAATCTCCAGCACACGCGCATATTCTTCGTAAAGATAACCCACACGGTGATCAGTCTTACGGACGTATGCGCGCTATTGAGTTGAATGGTATCGCTGACGACGCCACATTGGCTTACGGTAAGTCCCAAGCGCAGTTGGCGGATTACGTTAACCAACGTAGCGCTAAGGCCACCGACTTCTCCGATAAGATGCTCAGGAAGAGCGCAACGCCTCGCACCATCACAGGCACATTTACGATGCTGCCGGGTCTTTCTTCTATTACGTCTGCCAAAGACACCGAAGCCTCCGGTGTCGGTACCAACCTGCAAGTCGATGATAAGGTTGTGCGTTTGATTGCACGCGACTCTTCAACGATTAGTGCGGGTAGTCAACCGATTACCTTTAATGCGGGTGCTAACGTAATGGTGCTGTATCCAGATGCGCGTGAGCTGCAATGGAACGGTAAGAAGATTCTTGACCCGACTACAGTTGCCCCGTACTTACCGGGTAACGAAGGTGGGGGTTCTGGTATCTTCTACGCCACCCCAACAGCCACGATGACTGTGAGTGGTAGCGGTATTCAGTCGATGCCGTTTATCTTCACCTGGGTAGCCCCAGATGACACAGACAACGCTGCTTTAGCTCTGCGAATGCTGACCACTGAGTTCGGCAATTCAGAATCGTTGGCTGCTACCCCGGCCCTGATTCAGAAACTGGCGAATGAGTTCACCGGTAAACTGGAACAAGCGAAGGCGTATATCAACGGCCTGTCTCTGATGTCATCTGTGTCGCTGGATAAGACCAGCTTCAACCTGGATGCTGTGGAGAACATTGCTGACTTGTCACTACCAACGTCTAGCTTACAGCGCCAGGAAATGGCGAAGTACGCGAAGAACGGTCACACTCATGATGCTTCTGCATTCGGGATTGGCGACGCCACTACCGCGAAAGCGGGTTTGGTGCAGTTCGGTGGTTTGGTTAATGATGCAACGCTGGCGTTAGAAGGTCAGTACGTGGCGACTCAGTACGATACGGTTGAGAAGTTAGAGGCTACCGTTGGTAATTCTGATACCGAAGCGATTATCGATATTTTGCGTTTCGGCGCATCCGGTAATAATGAGGTGATGAATGGCGGCAGTTTTAACGGTTGGATGGTGGTGCTGAACCCGAATAACTATTTCGTGAAGAAAGACTACGCTGTCCCGACCGCTACCTTTAACCTGTCTGAACTATTCCCGGTGAATCATGAAGATACCGTGATTGGCGTGTATGTGGATATTGTTGGCGACACTGCGCAGTATGTGTTGAAAGATAGTATCAACTTTGCGGAAACGGATACGTTAACCCGCATTGGTGAAATCTACACAGATGAAACGCAAATCTCCGGTTTGTCCATCCGTAACACCACCCGCCTTGGCAACTTCCGTGAGTTGGAAGAACATGCCGCCGACGTAAGCGCCCATATTCCACGCGCCATGACGCAGGCTCAGTTCGGTTACACATTTACGAACGATGGTCCGACTTGGAACAACGGAGTACCGGGAACACGACGTTTTGACGGCGACTGGCGTATGCTTAAAGGTCCAGACTACGTACCAATGGAAAACGTGGACTGGCCAAGCTCGACAAGTCTGTTGTTGAAGAAGACCGGTACGGGTGTTGCTAATCACCGTCATCTGGTTCACCAGTGTCCGATTAAGAAATCGGGGAACATTGTTGCTGCGTTCTCATCAAGTGATGTTACTGCATCGAATGTGTTCGAAGTTGTATTGGCTTCCTGGAAAGATAGCAAAGAGCGACGTAACCGAATCTCTCTGCTTATTCAGCGAACTAACAACATCACGGGTAGCGAAGGGACGTTGTGTTATTTGGGCTTTGCGATCAACTACGGCACTAACCGCCAGGTGTTGATTGGTATCAATGCCTCTTCGTTCACGACGGCTAACGATTGGCAGAATATGGCCGCATCCGTTACTTTCAATCTCGATCACAACGCGAGCGGCGCATTGCAGATTACCGGCGGCGTGAATGTCAATCCACTCGGGTTTACTTTCTCAGTAGACTTAGTCGGTAAACGTGTGACCTTCTGGCGCACGTATGGCGCAGCAGCCGTAACGGAAGCGTATGATTTGGCACCGTACTTGACCGCAGCCCAGGTTGATATCTCTCCCCTGGTGAGTGTGCCTACTTGGCCTGTGTATCATGGAATCGGCGGCACATTGGCTTCGGACGCAACCGTTGCACTGACCTACGACATGGGGAATTTTGCACCACGTCCAGGTTACGACACCGCGTTCGATTACATCCATACGCTTTCAGAGATGAACCGTATCCGTGTTATCACTGCACCTTCTGCAAGCAAGCTATCGAATGCCGATGTTCGTACAGCTGCGGCTGCGAAGGATATGGCAACGGCCGCGAAGCGACCAGACGGGGTTCCTGATTACCTGAATAAAGACCGCTTAGCGACCTACAGCGATGGTGTTAATTACACCGCGGTGGTAGTGCGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5dca4879435d19369ee9ebcbc4e6a29c8eec818268505247bd844017779e2c30
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2841
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50