Protein

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Genbank accession
ARV76648.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDDYLLRYAIDKVWQNPTQDKQFVYELRKLTPKYGVQDTWVVEYQRYYLPTNKANDLYHIYQIGSMIPANLGLPKIKDTWISMKTLAKDYLTLAEAYVTSGIRFPMDETYVLITQSQNMLVAVKINDRYPSLEDHKLYFHCYHNAYFSTERASERGDDWIQVDTLIATGSTAIRQMQIAIIDTIKDRGGIPQYFVNGKAVDEISILTAQGGDYCEFILDPSIKAVYEFPLAGLPVFNSSLDKQRKYILHYPGKQVEPTIDYYDDTEIFLCKRGQRPTAFEGTYFQHNDGIWSRQLTHRDYSVPVARTAELMAENDFLGGDDSDKFFRMYIRRSGNFEELIADASRIEELYKLTDQQIINLMTGADSTNPLWRADALEKTAYVQFMSADVNFIYPITFNEPELNSEGKVEAQNFAGEVFGYHECAHLLNDNPAIVFLDPSDNRRKAKLAYNFWRNATAFEYNEKGILLGYHYHVGGEEYFVRDQTTHLVECVTGEGSENLHGVYGNGSIDLTGGYGWRVYATAVWGGVPTNEWIDITDREDRAKWGYYDSTLGAEKWVWTADPKEWYGYLRTDRYFYLKEMRFTEDTGIIRFAIDNWEDQAGDTVNRLMAIPMGEKDVFFNNYSMIYGLDYRSNDIYTVLDNLEHRNVGGINTVLVRCTGFCTPDLKYYPPSELGFVEYGVLSNDATYQLHSHKVQRIVVDGHYKSPKDVVFAEESGSHIIESERNGAPFQIQVPQVVFRNVFIDDYKARVEDDLRDKYTQDAMSYYFPKVEHPYPDTFVKHYAVYSAFSNKILKDILNGTLKPPFKDGRYTDMDIARVLKPYEWLVPLDILNNDYNTNHVRVYPHWEINPIGLERDQYDFYMRIIKMYLQRPLDTAPFIYLIRT
Physico‐chemical
properties
protein length:884 AA
molecular weight: 102781,36840 Da
isoelectric point:5,10331
aromaticity:0,14253
hydropathy:-0,46154

Domains

Domains [InterPro]
IPR055617
STR
2–875
IPR055617
ARV76648.1
1 884
Architecture
STR
STR 2-875 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARV76648.1
1 884
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,8225
Central domain 241 873 634 0,6823
C-terminal 874 884 10 0,1226
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-873
C-terminal
874-884

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Phabio
[NCBI] 		2006668 Uroviricota > Caudoviricetes > Chimalliviridae > Phabiovirus phabio >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARV76648.1 [NCBI]
Genbank nucleotide accession
MF042360 [NCBI]
CDS location
range 8892 -> 11546
strand -
CDS
ATGGACGATTATCTTTTGCGGTATGCGATTGATAAAGTCTGGCAGAACCCTACGCAAGATAAACAGTTTGTGTATGAGCTTCGAAAGCTGACACCTAAATACGGTGTTCAAGATACGTGGGTAGTTGAGTATCAACGGTACTATCTGCCCACTAACAAAGCTAACGATCTTTATCACATCTATCAAATTGGTTCCATGATCCCTGCTAACTTAGGTTTACCTAAGATCAAGGATACATGGATCAGTATGAAGACTCTTGCTAAGGACTACTTGACTTTAGCTGAAGCATACGTAACAAGTGGGATTCGTTTCCCAATGGATGAGACTTATGTACTCATCACTCAGTCACAGAACATGTTGGTGGCTGTTAAGATTAACGATCGTTATCCATCACTAGAGGATCATAAGCTTTACTTCCATTGCTACCACAACGCATACTTCTCTACCGAACGAGCGTCTGAACGTGGCGATGATTGGATTCAAGTCGATACCCTCATTGCAACTGGTAGCACAGCTATCAGACAAATGCAGATTGCCATCATCGATACTATCAAGGATCGTGGCGGTATTCCACAATACTTCGTTAACGGCAAAGCGGTTGATGAGATTAGTATTCTGACTGCACAGGGTGGGGACTATTGTGAGTTTATCTTAGACCCTTCTATTAAAGCGGTATATGAATTCCCTCTTGCAGGGCTACCAGTATTTAATAGTTCTCTGGATAAACAACGTAAGTACATCTTGCACTATCCAGGAAAACAAGTTGAACCGACAATTGACTATTACGATGACACAGAGATTTTCTTGTGTAAGCGTGGTCAACGTCCAACAGCTTTTGAAGGGACCTATTTCCAACACAACGATGGTATCTGGTCACGTCAGTTAACACACCGAGATTATTCTGTTCCCGTTGCACGTACTGCTGAACTCATGGCAGAGAATGATTTCTTAGGTGGCGATGACTCTGACAAATTCTTCCGTATGTATATTCGTCGCAGTGGTAACTTCGAAGAACTAATTGCTGACGCTTCACGTATTGAAGAACTCTACAAGCTCACTGATCAACAGATAATTAATTTGATGACCGGTGCTGACAGTACTAACCCATTGTGGCGTGCTGATGCCTTAGAGAAGACTGCATACGTACAGTTCATGTCTGCTGACGTTAACTTTATTTATCCAATCACTTTTAATGAACCGGAATTAAACAGTGAAGGTAAAGTAGAGGCACAGAACTTTGCGGGCGAAGTATTTGGTTATCACGAATGTGCTCACCTGTTAAATGACAACCCTGCAATTGTTTTCTTAGATCCATCTGACAATCGTCGTAAGGCTAAACTGGCTTACAACTTCTGGCGGAATGCTACGGCATTCGAATATAACGAGAAAGGGATTCTGTTAGGGTATCATTACCATGTTGGCGGTGAAGAGTATTTCGTAAGGGATCAAACAACCCATCTGGTAGAATGCGTTACAGGCGAAGGTTCTGAAAACCTGCACGGTGTGTACGGTAACGGTTCAATCGACCTGACAGGCGGTTATGGGTGGCGTGTATACGCTACTGCGGTATGGGGCGGTGTACCAACTAACGAATGGATTGACATAACTGATCGGGAAGACCGAGCTAAGTGGGGTTATTACGATTCTACACTCGGCGCTGAGAAATGGGTATGGACTGCCGATCCTAAAGAGTGGTACGGGTATCTGCGTACAGATCGTTATTTCTATTTAAAGGAAATGCGATTCACAGAAGACACAGGTATCATCCGTTTTGCTATCGACAACTGGGAAGACCAAGCGGGCGACACTGTCAACCGACTGATGGCTATCCCGATGGGCGAGAAAGATGTGTTCTTCAATAACTATTCCATGATCTATGGATTGGATTACAGAAGCAACGACATTTATACAGTCCTGGATAACCTGGAACATCGTAACGTCGGTGGCATCAATACCGTTCTTGTACGTTGTACTGGTTTCTGTACACCAGACCTTAAGTACTACCCTCCATCTGAACTGGGTTTTGTTGAATACGGTGTGTTGTCTAATGACGCTACCTATCAACTGCATTCCCACAAGGTTCAACGGATCGTAGTAGACGGTCATTACAAATCACCTAAAGATGTTGTGTTCGCTGAGGAATCAGGAAGTCACATTATCGAAAGTGAACGTAATGGTGCGCCCTTCCAGATCCAGGTACCGCAAGTAGTTTTCCGTAATGTCTTTATTGATGATTACAAAGCTCGTGTCGAAGATGACCTGCGTGATAAATACACTCAGGATGCGATGTCGTACTATTTCCCTAAAGTAGAACATCCTTACCCTGATACCTTTGTTAAGCACTACGCTGTTTACTCTGCGTTCTCTAACAAGATCTTGAAGGACATTCTTAATGGTACTTTGAAACCACCATTTAAGGACGGTCGTTACACGGATATGGATATTGCTCGTGTGCTCAAGCCATACGAATGGTTGGTCCCGTTGGATATTCTTAACAATGATTACAACACTAACCATGTGAGAGTTTATCCACATTGGGAAATTAATCCTATTGGACTGGAACGTGATCAATACGATTTCTATATGCGTATTATCAAAATGTATCTCCAGCGTCCTTTGGATACAGCCCCATTCATTTACCTGATTAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f23ebb7d73b405a780a9e27760efa18f07cc7cc3055f4e18af39dc9cfd31add0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2656
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50