Protein

View in Explore
Genbank accession
ADD80791.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MADYQKIYLRITGTIGDTPEDADPFPDRVMATGSAFIKPNIRDGYAENAVGPDGIDELNLPSPITCTITDGMVTYNGEPFVWLLVSNEKWNWNISFPQLRINGVTKKLDSFNFDLEPATTAQKADPNYPGINLAPLIEFPNPETGQKSVRGPRGWGIETIELVGDDQFRFTLDDPLHTVLPLVTVPALTINQETLDAAAAAVYGAELSYQNKLASDAARDLSFTYRNAAEGFKNTASTQATTATTKAGEATTARNEALGFRNEAEGFKNTAGTSASNAATSASEALGYRNTAGTHASNASTSASNASDSATTAGNHAASALTYRNQAEGFKNTAEQAVLGVVPDNSIATAKLQNLAVTAAKIANATITGTQIAGNAISSSHIVDGTITNADISATAGIAKTKLETGVQTSLGLADNAPQMYAGLTKITEWYGTQAAYDLLPSGTKTAAGFRAAIY
Physico‐chemical
properties
protein length:455 AA
molecular weight: 47783,27810 Da
isoelectric point:4,76700
aromaticity:0,07473
hydropathy:-0,24769

Domains

Domains [InterPro]
DC_1343
STR
34–452
DC_1343
ADD80791.1
1 455
Architecture
STR
STR 34-452 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodococcus phage ReqiDocB7
[NCBI] 		691966 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prescottella equi
[NCBI] 		43767 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADD80791.1 [NCBI]
Genbank nucleotide accession
GU580940.1 [NCBI]
CDS location
range 5428 -> 6795
strand +
CDS
ATGGCAGACTACCAGAAGATCTACTTGCGGATCACTGGCACCATTGGTGACACCCCGGAAGATGCTGACCCGTTCCCGGATCGCGTCATGGCGACCGGCTCTGCCTTCATCAAGCCGAACATTCGCGACGGCTACGCCGAGAACGCTGTCGGTCCGGACGGCATTGACGAGCTGAACCTTCCGTCCCCGATCACCTGCACCATTACCGACGGCATGGTCACCTACAATGGTGAGCCATTCGTCTGGCTTCTCGTGTCGAATGAGAAGTGGAACTGGAACATCAGCTTCCCGCAGCTTCGAATCAATGGCGTCACCAAGAAGTTGGACTCATTCAACTTCGACCTCGAGCCTGCGACGACTGCACAGAAGGCTGATCCGAACTACCCCGGCATCAACCTCGCACCGCTGATCGAGTTCCCTAACCCGGAGACCGGACAGAAGTCTGTTCGCGGTCCTCGCGGTTGGGGTATCGAGACGATTGAACTTGTCGGCGATGATCAGTTCCGGTTCACCCTGGACGATCCGCTGCACACAGTTCTTCCGCTGGTTACCGTTCCGGCCCTGACGATCAATCAGGAAACTCTTGATGCTGCTGCGGCTGCGGTATACGGAGCCGAGCTGAGTTACCAGAACAAGCTTGCAAGTGATGCGGCTCGCGACCTCAGCTTCACGTACCGGAATGCTGCTGAGGGATTCAAGAACACTGCCTCTACTCAGGCAACCACTGCAACGACAAAGGCTGGCGAGGCAACCACTGCCCGCAACGAAGCATTGGGGTTCCGTAATGAAGCGGAGGGTTTCAAGAACACAGCTGGAACGTCAGCAAGTAACGCGGCGACTTCGGCGAGCGAAGCGCTCGGGTACCGGAACACAGCCGGAACTCACGCGAGCAATGCTAGTACTTCGGCTAGCAATGCTTCTGACAGTGCTACCACTGCTGGTAATCATGCTGCTAGTGCGCTGACCTATCGCAACCAGGCCGAGGGGTTCAAGAACACGGCAGAGCAGGCTGTGCTCGGGGTCGTACCCGACAACAGTATTGCTACCGCGAAGCTTCAGAACCTTGCGGTGACTGCTGCCAAGATTGCGAACGCCACGATCACCGGCACGCAGATCGCTGGCAATGCTATCTCTTCTTCGCACATTGTAGACGGCACAATCACAAACGCTGACATTAGCGCGACTGCTGGCATCGCCAAGACGAAGCTTGAGACTGGGGTTCAGACTTCGCTTGGACTTGCGGACAATGCTCCGCAGATGTACGCAGGTCTCACGAAGATCACCGAGTGGTACGGCACCCAGGCGGCGTACGACCTTCTGCCTAGCGGCACTAAGACTGCTGCTGGATTCCGGGCGGCGATCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
97b390b49e4286b927f28edebfebdad6a7660fc56a00ff3b453fe6f84d8fb20f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7599
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and functional analysis of Rhodococcus equi phages ReqiPepy6, ReqiPoco6, ReqiPine5 and ReqiDocB7 Summer,E.J., Liu,M., Gill,J.J., Grant,M., Chan-Cortes,T.N., Ferguson,L., Janes,C., Lange,K., Bertoli,M., Moore,C., Orchard,R.C., Cohen,N. and Young,R. 2011 21097585 GenBank