Protein

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Genbank accession
QPI14498.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGELAVSRREFDTVQGDFTSGVILKVKNEVIAYSHSRYRWNGTFPKVVDPDSAPNSTDWINVDANPALSELAKSVGASLIGYKPTGTTTITGTVKGKLDGFIDFANDYCGGPITGQPDLTSQLQQAIIDAFNSGVGDIKIVGDFYISDMILWYPGVRLLGGRYDTTLIRASNTFPVGGTMLRSYRPPLWNAGCHGLALENIYFVGRSAKDLHAVDINDASYFNLEGVRYDLFNKALSFNRWIDETRVDTGGTITYPNAHSVEMGGQSYFGTVTRCYAGSCVTCVDFNGVVNRCTFTSNTWTSSDLAYNFSNPRGVYETNTFITCNIEGVKVVWEWFFSINSPYHNVWINTSIDNGNPDITCLAKDGGRQTFVGLAIFPYGNPSLVNWYNINPNGHRSTVLGTDLGESLPEDQLKTQVREELHTLTGIANKQWAGQQVTETIPAGGYKAINISIPGLKGNSAVIASLSAIYAGVSVSAASNNTGIVAVIINNHSASPVEINAYLSVTGIAKSFL
Physico‐chemical
properties
protein length:513 AA
molecular weight: 55639,70320 Da
isoelectric point:5,42525
aromaticity:0,10721
hydropathy:-0,09123

Domains

Domains [InterPro]
DC_1348
ATT
2–183
DC_1348 DC_1937
IPR040775
RBD
7–57
IPR040775
G3DSA:2.10.10.80
ATT
10–72
G3DSA:2.10.10.80
QPI14498.1
1 513
Architecture
ATT
RBD
ATT 2-183 | RBD 355-512 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI14498.1
1 513
Domain Start End Length (AA) Confidence
N-terminal 1 119 119 0,9909
Central domain 120 406 288 0,9897
C-terminal 407 513 106 0,9615
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-119
Central
120-406
C-terminal
407-513

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GEC_vB_GOT
[NCBI] 		2777375 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI14498.1 [NCBI]
Genbank nucleotide accession
MW006476.1 [NCBI]
CDS location
range 120919 -> 122460
strand -
CDS
TTGGGAGAACTGGCTGTTTCACGTCGTGAATTCGATACTGTTCAAGGTGATTTTACTTCGGGGGTTATCCTTAAAGTTAAAAATGAAGTCATCGCGTATAGTCATAGTCGATATCGTTGGAACGGCACTTTTCCAAAAGTTGTTGACCCAGATTCAGCACCAAATTCCACAGATTGGATAAATGTGGATGCCAACCCAGCATTATCTGAATTGGCTAAATCAGTTGGGGCTTCATTAATTGGATATAAACCTACTGGAACAACGACCATCACAGGAACGGTTAAAGGCAAATTAGACGGATTTATAGATTTTGCTAATGATTATTGCGGTGGTCCTATCACTGGTCAACCAGATTTAACTTCTCAACTACAACAAGCAATAATTGATGCATTTAATTCCGGTGTCGGCGATATTAAGATTGTTGGGGATTTTTATATCTCCGATATGATATTGTGGTATCCTGGGGTTCGATTGTTGGGCGGTAGATACGATACTACATTGATTCGTGCTTCTAATACTTTCCCTGTTGGTGGTACAATGTTGCGTTCATATCGCCCACCGTTATGGAATGCTGGTTGTCATGGACTGGCGCTAGAAAATATATATTTTGTTGGCCGGAGTGCTAAAGACTTACACGCTGTGGATATCAATGATGCTTCATATTTTAATCTAGAAGGGGTGCGTTATGATTTATTCAATAAAGCACTTTCATTCAATAGATGGATAGATGAAACTCGTGTTGATACTGGTGGGACTATCACATACCCAAATGCTCATAGTGTTGAAATGGGTGGGCAATCTTATTTTGGTACTGTAACCCGTTGCTATGCAGGTAGTTGCGTTACTTGCGTAGATTTTAATGGGGTTGTGAATCGTTGCACATTCACAAGCAACACTTGGACGTCCAGTGATTTGGCATATAACTTCAGTAATCCTCGTGGTGTTTATGAAACCAACACATTTATCACCTGTAATATTGAGGGTGTGAAGGTTGTTTGGGAATGGTTTTTCTCGATAAACTCCCCATATCATAATGTTTGGATAAATACCAGTATAGACAATGGTAATCCTGATATCACATGCCTCGCTAAAGATGGAGGTAGACAGACTTTTGTTGGGTTGGCAATTTTCCCTTATGGGAATCCGAGTTTGGTTAACTGGTATAATATAAATCCAAATGGTCATCGCAGTACCGTTCTTGGTACAGATTTGGGGGAATCGTTGCCGGAAGATCAATTGAAAACCCAAGTGCGCGAGGAATTACACACATTAACGGGTATTGCTAATAAACAATGGGCAGGACAGCAAGTTACTGAAACTATCCCAGCAGGTGGATATAAAGCTATCAATATCAGTATTCCTGGTTTAAAAGGAAATTCCGCTGTGATCGCTTCTTTATCAGCAATATATGCTGGCGTTTCTGTGAGCGCAGCCAGTAATAATACTGGGATTGTGGCTGTTATTATAAACAACCATTCGGCATCTCCTGTTGAAATAAACGCATATCTCAGTGTCACAGGCATAGCCAAAAGTTTCTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5ef7b2cf37c6fe72c81f954a6e0677597cf43dd1206a963b3fd66f1eac7c005
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7775
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50