Protein

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Genbank accession
WQZ00053.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVLSDWTDLSILDIPSGRLKRGPYTDGAFLPKTGWYRSRFNKLFLDDRADLPPVFIRPLKVIAGNLDAGLYVVWALSFVRLQTGLFLQWYSKASTTISSTGGIEVALSEAPGDDRLVRLYVQRAAPGAPLGPMVYLGELRGGDTTFVYTSHLQEGERVSFAIPKGRGQYAAYYNGRYFYQSDELDVLGASSAPPSQSTNPSVDTSGGGVLVLTDDGFGLAPVAENAQPVVIGAWANWDAFVSTSAGAFVAVRRGGKTEIYHASDGNLLGWSLVYSDPSGVGLTLAAASPSRVVFIGGGKAVVGLLDGNAFLASSGWREVNLPVSSQVKDLIWTGQEFAAIVDRGLLRGGVDAANWTLVAPPASLDASFNEWRHLAFANGRYFIYAAQPLGGGEWFNRIFVYNGSTWASEYTKPRNVNGMVHKRFSYLYADADRVVVGHGLKGGWYWDASWPVPVPIEESDYFSEYRPTQFPDGFIRETWYNSPPEGALGQPYRPGYGIALFVSGNKLTAYDYRVSPVRRYEQILSPLKGVGVYQGNRVVVHTTTGSLNVGTFSGTSGPFTINYTYYAARLTNLVAERPIYIGPDYYYIVGDNLRVSAYRLPTGVQGWSASITHEDGNVVLVSTQQGFLPLTATYRVFFGPPGNTNDIGILGFNSQGPIYIRSKGGVVLIGKRAAPLPAQVAVYSNGSFVVHTLPSDLRTIVYDGANWYAVCVGHIVKVEASGLTTIATGSFTGGGDGIGGKIYVGHADGSIKELDTTSGVFTDVATQSHNFMAGVMADTTPLFRLGNTAYFLDGSSLRPITSSPLGTLQLIGKAGVPSSTPDEGPGVNTIRLPANAVVWTEPGYINLTTPFNYHAFVWRASERINEIAPSPNGVLVMADNELYLMAGRFSSVQDTRIAPYPAPIGLDRGGRVGSMGGVFFVPWGGRLYALDGGQAQLISYQVEDGVPFVAVLYDAKHNMLVARKADGRVLRYDLVRKAWFDDMEGSLDIAYYIDGIVYLREVEGSILPYRLTEEGQQLSENYYRIPQEVWIDTALMELGTIKRLRAIYLYMKSDGPPNARCYVYNEQEAEVASAALAAIGSNPYGLGRYQVRFPPVITLAPRRIRITFSGFRFDLAPQIEVHYEERHRKV
Physico‐chemical
properties
protein length:1130 AA
molecular weight: 123197,73140 Da
isoelectric point:6,26016
aromaticity:0,12212
hydropathy:-0,05858

Domains

Domains [InterPro]
SSF75011
STR
342–975
SSF75011
WQZ00053.1
1 1130
Architecture
STR
STR 342-975 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQZ00053.1
1 1130
Domain Start End Length (AA) Confidence
N-terminal 1 1129 1129 0,9855
Central domain 1130 1129 1 0,3674
C-terminal 1130 1130 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1129
Central
1130-1129
C-terminal
1130-1130

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage TH115
[NCBI] 		3079687 Viruses >
Host Thermus thermophilus HB8
[NCBI] 		300852 Bacteria > Deinococcus-Thermus > Deinococci > Thermales > Thermaceae > Thermus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ00053.1 [NCBI]
Genbank nucleotide accession
OR621297 [NCBI]
CDS location
range 22382 -> 25774
strand -
CDS
ATGGTGCTGTCGGACTGGACGGACCTGAGCATTCTGGACATCCCCAGCGGGCGGTTGAAGAGGGGTCCCTACACCGACGGGGCCTTCCTGCCGAAGACGGGCTGGTACCGGAGCCGCTTCAACAAGCTGTTTCTGGACGACAGGGCCGACCTGCCCCCCGTGTTCATCCGCCCCCTGAAGGTGATAGCGGGCAACCTGGACGCCGGGCTGTATGTGGTGTGGGCGCTGTCCTTTGTCCGCCTGCAAACGGGCCTGTTCCTGCAATGGTACTCCAAGGCCAGCACCACGATATCCTCCACCGGCGGGATAGAGGTTGCCCTGTCCGAGGCCCCCGGCGACGACAGGCTGGTGCGCCTCTATGTCCAGCGGGCGGCTCCAGGGGCTCCCCTCGGGCCGATGGTCTACCTGGGGGAGCTGAGGGGCGGGGACACCACCTTCGTCTACACCTCCCACCTCCAGGAGGGGGAACGGGTAAGCTTCGCCATCCCCAAGGGCAGGGGCCAGTACGCCGCCTACTACAACGGGCGCTACTTCTACCAAAGCGACGAGCTGGATGTTCTCGGGGCCTCCAGCGCTCCACCAAGCCAGTCCACTAACCCGAGCGTTGACACCTCTGGAGGGGGCGTCCTTGTCCTCACCGACGACGGGTTCGGCCTAGCACCCGTGGCCGAGAACGCTCAGCCCGTAGTCATCGGGGCGTGGGCCAACTGGGACGCTTTCGTCAGCACCAGCGCCGGGGCTTTTGTCGCCGTGCGCAGGGGCGGGAAGACGGAAATCTACCACGCCTCCGACGGCAACCTGCTGGGGTGGAGTCTGGTCTACTCCGACCCGAGCGGCGTGGGGCTCACCCTGGCGGCGGCCAGCCCGAGCCGGGTCGTGTTCATCGGCGGCGGCAAGGCCGTGGTGGGCCTGCTGGACGGCAACGCCTTCCTCGCCTCTTCCGGGTGGAGAGAGGTCAACCTGCCCGTTTCCAGCCAGGTGAAGGACCTCATATGGACCGGGCAGGAGTTCGCCGCCATAGTGGACCGGGGCCTGCTCAGGGGCGGGGTGGACGCCGCTAACTGGACCCTGGTTGCCCCGCCTGCCTCGCTGGACGCCAGCTTCAACGAGTGGAGGCACCTCGCCTTCGCTAACGGGCGCTACTTTATCTACGCCGCACAACCCCTCGGTGGCGGGGAGTGGTTCAACAGGATTTTCGTCTACAACGGGAGTACGTGGGCTAGCGAATACACCAAACCCCGCAACGTAAACGGCATGGTCCACAAGAGGTTTTCCTACCTCTACGCCGACGCAGATAGGGTTGTGGTTGGGCACGGACTGAAAGGGGGGTGGTACTGGGATGCCAGCTGGCCCGTTCCCGTTCCCATTGAGGAAAGCGACTATTTCTCAGAATACCGACCGACTCAGTTTCCGGACGGGTTCATACGGGAAACTTGGTATAACTCGCCGCCAGAAGGAGCTTTGGGCCAGCCTTACCGCCCAGGCTACGGCATAGCCCTGTTTGTGAGCGGCAACAAGCTGACCGCCTACGATTACCGGGTGAGCCCGGTTAGGAGGTACGAGCAAATCCTGTCGCCCCTGAAGGGCGTTGGGGTATACCAGGGCAACAGGGTTGTCGTGCACACCACTACTGGCTCTCTCAATGTCGGCACTTTCTCAGGTACATCCGGCCCGTTCACTATCAACTACACCTACTATGCTGCCAGGCTCACAAACCTAGTAGCGGAGCGGCCAATCTACATAGGCCCGGATTACTACTACATCGTCGGGGACAATCTTAGAGTATCGGCCTACAGGTTGCCTACAGGCGTTCAGGGGTGGAGCGCAAGCATAACCCACGAAGACGGGAATGTGGTGTTGGTGTCCACACAGCAGGGCTTTTTGCCGCTAACGGCAACCTATAGGGTGTTCTTTGGCCCCCCAGGAAACACAAACGACATCGGTATCCTGGGGTTCAACAGCCAGGGGCCGATTTACATCAGAAGCAAAGGTGGTGTTGTTTTGATAGGTAAGCGAGCCGCCCCGTTGCCGGCGCAGGTGGCCGTGTACAGCAACGGCTCTTTTGTGGTACATACCCTTCCCTCGGACCTCAGAACCATCGTTTATGATGGGGCGAACTGGTATGCGGTGTGCGTCGGGCACATAGTCAAGGTTGAGGCGTCCGGGCTGACGACCATCGCCACGGGCTCTTTCACGGGCGGCGGCGATGGCATTGGGGGAAAGATTTATGTCGGCCACGCCGACGGGAGCATCAAGGAGCTGGACACCACCTCTGGTGTGTTTACCGATGTAGCTACGCAGAGCCACAACTTTATGGCCGGGGTTATGGCGGACACAACGCCCCTCTTCCGCCTGGGCAACACGGCCTATTTCCTTGACGGCAGCAGCCTAAGACCCATCACCTCTTCCCCGCTCGGCACCCTTCAGCTCATCGGCAAGGCAGGGGTGCCTTCTTCTACGCCGGATGAGGGGCCTGGCGTGAACACCATACGCCTGCCCGCAAACGCCGTGGTGTGGACCGAGCCTGGGTACATCAACCTCACCACGCCCTTCAACTACCACGCCTTCGTGTGGAGGGCCTCGGAGCGCATCAACGAGATTGCGCCGTCCCCTAACGGGGTGCTGGTGATGGCCGACAACGAGCTGTACCTCATGGCGGGCCGCTTCTCCAGCGTCCAGGACACCCGCATCGCCCCCTACCCCGCCCCCATCGGCCTGGACAGGGGAGGAAGGGTGGGCAGCATGGGCGGCGTCTTCTTTGTGCCGTGGGGAGGCAGGCTTTATGCGCTGGACGGGGGCCAGGCCCAGCTCATCAGCTACCAGGTGGAGGACGGGGTGCCTTTTGTGGCGGTCCTGTACGACGCCAAGCACAACATGCTGGTAGCCCGCAAGGCGGACGGCAGGGTGCTGAGGTACGACCTGGTGCGCAAGGCGTGGTTTGACGACATGGAGGGCTCCCTGGACATCGCCTACTACATAGACGGCATCGTGTACCTGAGAGAAGTTGAGGGCTCCATACTGCCCTATCGCCTTACCGAAGAGGGCCAGCAGCTCAGCGAGAACTACTACCGCATACCGCAGGAGGTGTGGATTGACACGGCGCTGATGGAGCTCGGCACCATCAAGCGCTTGAGGGCCATTTACCTCTACATGAAGAGCGATGGGCCGCCCAATGCGAGGTGCTATGTGTATAACGAGCAGGAGGCCGAGGTAGCATCGGCTGCACTCGCCGCCATCGGCTCTAACCCGTACGGCCTTGGGCGGTATCAAGTGCGCTTCCCGCCTGTCATCACTCTGGCCCCGAGGCGCATCCGCATTACTTTCTCCGGCTTCCGCTTTGACCTGGCACCGCAGATAGAGGTGCACTATGAGGAGCGGCATCGGAAAGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e3a9f130b2c5d6d68fe189b33c76298fd5fdd098a6134a07da1075a79de1e72
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2679
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mechanisms of the biosynthesis of DNA backbone phosphorothioation and phosphorothioation-based TdpABC defence system in thermophiles An,T. — — GenBank