Protein

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Genbank accession
YP_009042248.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MGTMRGITGEQNGVYFGYALYDLVNEKLIPFDQIGEGGSSVPGPQGPQGEKGDKGDPGPQGPQGVQGAPGNPGEKGPQGGQGPQGEVGETGPQGPQGPVGPTGPQGEKGERGEPGPQGPEGPAGPQGEQGPAGATGPVGPSGATGLVWRGNYDDSISYDVNDAVGYQGATYFSTQPSTGIPPEATGTRVNDHWALMASEGAPGPVGPAGPTGPQGLQGPVGPAGPSGATGPAGPAGPQGEQGPQGLQGPQGQRGIQGVQGEKGEKGDQGPVGPAGPAGPQGEQGPPGETGPKGDKGDNALPTISGIYASPINKTNSWIQLPGNNLGNVRLILSANNKVSQTRVGFSAGTSSVAKRIGFSYALTTTYTDVNRIKSGRTGPTSVSNTVVYPSDSTINVGFGDKAVFVVFCHDTLEAWEVTVAGVAAKTAVGDTSGRLAVHAVQISGDSELLTGNVYNP
Physico‐chemical
properties
protein length:456 AA
molecular weight: 45299,90340 Da
isoelectric point:4,70669
aromaticity:0,05263
hydropathy:-0,57785

Domains

Domains [InterPro]
DC_0876
STR
3–236
DC_0876 IPR008160 DC_1012
IPR050149
Unmapped
37–298
IPR050149
IPR008160
STR
88–145
IPR008160 DC_2298
G3DSA:1.20.5.320
STR
269–321
G3DSA:1.20.5.320
YP_009042248.1
1 456
Architecture
STR
RBD
STR 3-330 | RBD 331-454 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage CR8
[NCBI] 		1327934 Uroviricota > Caudoviricetes > Vequintavirinae > Certrevirus CR8 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009042248.1 [NCBI]
Genbank nucleotide accession
NC_024354.1 [NCBI]
CDS location
range 11393 -> 12763
strand +
CDS
ATGGGAACAATGAGAGGTATCACCGGGGAGCAGAACGGTGTATACTTTGGGTATGCACTTTACGATCTCGTTAACGAAAAACTTATCCCCTTTGACCAAATTGGCGAGGGAGGATCTTCTGTACCTGGTCCACAGGGTCCTCAAGGGGAGAAGGGGGATAAGGGAGACCCCGGTCCTCAAGGACCTCAAGGTGTCCAAGGAGCGCCGGGCAATCCTGGTGAAAAGGGTCCTCAAGGGGGCCAAGGCCCTCAGGGCGAGGTAGGGGAAACTGGTCCTCAAGGACCTCAGGGGCCAGTAGGACCAACAGGCCCTCAGGGCGAGAAAGGGGAGAGGGGTGAACCAGGACCTCAAGGTCCTGAAGGCCCTGCTGGCCCGCAAGGGGAACAGGGACCCGCCGGGGCAACAGGCCCCGTTGGACCTTCCGGTGCGACAGGTCTTGTATGGAGAGGAAATTATGATGATTCAATCTCCTACGACGTTAACGATGCAGTTGGGTATCAGGGTGCCACATATTTCTCTACTCAGCCATCCACAGGTATCCCACCGGAAGCTACTGGTACAAGGGTTAACGACCACTGGGCACTAATGGCCTCAGAAGGTGCGCCGGGACCAGTAGGTCCAGCAGGACCAACAGGTCCGCAGGGTTTGCAAGGGCCAGTAGGACCCGCAGGGCCTTCCGGTGCTACAGGTCCTGCCGGACCCGCCGGACCACAAGGAGAGCAAGGCCCTCAAGGGCTACAAGGACCACAAGGTCAGCGAGGTATTCAAGGTGTTCAGGGTGAAAAAGGGGAAAAGGGAGATCAAGGACCAGTAGGTCCGGCAGGCCCTGCTGGCCCGCAAGGGGAACAGGGACCTCCGGGGGAGACTGGCCCTAAGGGAGATAAGGGTGACAATGCCCTCCCGACCATTTCTGGGATTTATGCCTCCCCGATCAACAAAACGAACTCTTGGATTCAACTCCCCGGTAACAACCTGGGGAATGTTCGTCTTATTCTCTCTGCAAACAACAAAGTCTCTCAGACCCGAGTTGGTTTCTCCGCAGGAACTTCGTCAGTGGCGAAGAGGATCGGATTCTCTTATGCACTAACAACAACCTACACGGACGTAAATCGTATTAAGTCCGGGAGAACCGGCCCCACCTCGGTATCAAATACAGTAGTTTATCCGTCGGACTCTACTATCAACGTGGGGTTCGGCGACAAGGCAGTCTTTGTTGTTTTTTGCCACGACACCCTTGAAGCATGGGAAGTGACAGTGGCAGGGGTTGCTGCAAAAACTGCTGTGGGTGATACAAGCGGGCGTTTGGCTGTACATGCAGTACAGATCTCCGGGGACAGTGAGTTACTTACAGGCAATGTCTACAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
beed10d6f234dfa2096d96fc71b11d80fcb8e4dd57c1c941abcab70b38d8c606
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5440
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Cronobacter sakazakii Bacteriophage CR8 Kim,Y., Shin,H. and Ryu,S. 2012-06 — GenBank