Protein

View in Explore
Genbank accession
AZB50050.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVKYDIGNNEIVLHLREGKYITGFTTVGGYDKELGQVKVNREILPAYFFDNFAYERYLYYSKPEEVIENKNYVPPQINDDDEESQQITVPKEQYDSLKEELELMRKQQEAMMEMLQKLLGQKG
Physico‐chemical
properties
protein length:124 AA
molecular weight: 14611,34700 Da
isoelectric point:4,70453
aromaticity:0,11290
hydropathy:-0,76774

Domains

Domains [InterPro]
DC_0295
STR
4–124
DC_0295
IPR021358
STR
18–77
IPR021358 Coil
AZB50050.1
1 124
Architecture
STR
STR 4-124
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage 812h1
[NCBI] 		2419617 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB50050.1 [NCBI]
Genbank nucleotide accession
MH844529.1 [NCBI]
CDS location
range 86554 -> 86928
strand +
CDS
ATGGCTGTTAAATATGATATAGGTAATAATGAGATAGTATTACATTTAAGAGAAGGTAAATATATAACAGGGTTTACAACAGTAGGAGGGTATGATAAGGAGTTAGGACAAGTAAAAGTTAATAGAGAAATCTTACCTGCTTACTTCTTTGATAATTTTGCCTATGAAAGATATTTGTATTATAGTAAACCTGAAGAGGTTATAGAAAATAAAAACTATGTACCACCACAAATCAATGATGATGATGAGGAATCCCAACAAATTACTGTACCTAAAGAACAATATGATAGTTTAAAAGAAGAACTAGAGCTTATGAGAAAACAACAAGAAGCTATGATGGAAATGCTTCAAAAGCTCTTAGGTCAAAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
452d32b2d07f7d49d4a3cf2957f532192e06c9c65a4d624477a724ee54f82b32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5365
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic and genomic properties of spontaneous host-range Kayvirus mutants prove their suitability for phage therapy of staphylococcal infections Botka,T., Pantucek,R., Benesik,M., Maslanova,I., Petras,P., Ruzickova,V., Havlickova,P., Varga,M., Zemlickova,H., Kolackova,I., Florianova,M., Jakubu,V., Karpiskova,R. and Doskar,J. 2019-04-02 — GenBank