Protein

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Genbank accession
UYL23054.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MISNNAPAKMVLNSVLTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNVTRRDFTGVDTFSVTINNLKPTTTYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITGVRCESEPVDVGVGAPIVYIDTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPIGSYKVRISGQVSLPDGVTIDSSGYYEYPTVFEVRYNFVPPTAPVNIVFKAARIADGKERYDLRVQWDWNRGTGANVREFVLSYIDSAEFARTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPDAQDVTDSAVQTFILNESTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPIKKIINVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTKSGIWMGMDNATAKPKLDIGNATQYIRFDGDTLRISSGVVIGTPNGDIDIETGIQGKQTVFIYTLGTSLPTKPTSPAYPPSGWSKTPPNRTSNTQNIYCSTGTLDPVTNQLVSGTSWSDVVQWSGTEGVDGRPGADGKPGADGKPGADGKPGADGRPGADGQRGPGMYSLAIANLTAWNDSQANSFFTSNFGTGPVKYDVLTEYKSGAPGTAFTRQWNGSAWASPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNIIYDRAAALSSNPEGSYKMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76842,26860 Da
isoelectric point:5,53159
aromaticity:0,09972
hydropathy:-0,25253

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549 IPR057549
IPR057551
STR
104–196
IPR057551 DC_1191
UYL23054.1
1 712
Architecture
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYL23054.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 409 409 0,8708
Central domain 410 677 269 0,1606
C-terminal 678 712 34 0,9094
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-409
Central
410-677
C-terminal
678-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PS3-1
[NCBI] 		2985647 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYL23054.1 [NCBI]
Genbank nucleotide accession
OP594723.1 [NCBI]
CDS location
range 28379 -> 30517
strand +
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTTCTAAATAGCGTCTTAACTGGATATACGTTGGCGTATATCCAGCATTCTATCTATTCTGATTATGACGTTATAGGTAGATCTTTTTGGCTTAAAGAAGGTAGCAACGTTACTCGTAGAGATTTTACTGGAGTTGATACCTTTTCTGTAACTATTAATAACTTAAAACCTACAACAACTTATGAAGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTATCTGATAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATTACAGGTGTTAGATGTGAATCAGAGCCTGTAGACGTAGGTGTTGGAGCGCCAATAGTTTATATAGATACTACAGGAGAAGCTGATTATTGTACTATAGAATTAAAAAATAATTCTAATGCTAATAATCCGTGGGTTAAATATTATGTTGGTGCGTTGATGCCAACTATTATGTTTGGTGGTGTGCCAATCGGATCCTATAAGGTAAGAATTTCTGGACAAGTATCCCTGCCAGACGGAGTAACTATTGATTCATCTGGATACTATGAGTATCCTACTGTCTTTGAAGTTAGATATAACTTTGTACCTCCTACAGCTCCTGTTAATATTGTGTTTAAAGCTGCGCGTATAGCGGATGGTAAAGAACGCTATGATTTACGTGTGCAATGGGATTGGAATAGAGGGACAGGCGCCAACGTTCGTGAATTCGTTCTATCATATATAGATTCAGCAGAATTTGCTAGAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGTGCTGCTCAGTCAGCAACAATTATATCATTTCCATGGAAAGTAGAGCATAAATTTAAAGTGTCATCTATTGCCTGGGGACCAGATGCTCAAGATGTTACTGATTCCGCAGTACAGACATTTATATTAAATGAGAGTACTCCATTAGATAATAGTTTTGTTAATGAAACTGGTATCGAAGTAAATTACGCGTACATTAAGGGTAAGATCAAAGATGGATCTACCTGGAAACAAACCTTCCTAATAGATGCTGCTACAGGTGCTATTAATATAGGTCTTCTAGATGCAGAAGGAAAAGCACCAATATCTTTTGACCCTATTAAAAAGATAATTAACGTTGATGGAAGTGTAATAACTAAAACTATTAATGCTGCGAACTTTGTCATGACTAATTTGACTGGTCAAGACAACCCTGCAATCTATACTCAAGGTAAAACTTGGGGAGATACAAAATCTGGTATTTGGATGGGCATGGATAATGCTACTGCGAAGCCAAAACTGGACATTGGTAATGCTACACAGTATATTCGTTTCGATGGTGATACATTAAGAATTTCTAGTGGAGTTGTAATTGGTACACCTAATGGCGATATTGATATAGAGACGGGTATACAAGGTAAGCAAACAGTATTTATTTATACCCTAGGTACTTCATTACCCACTAAACCAACAAGCCCTGCATACCCACCTTCTGGTTGGTCTAAAACTCCACCGAATAGAACATCTAATACTCAGAATATTTACTGCTCTACTGGTACTCTAGACCCTGTTACTAACCAATTAGTATCAGGAACCAGTTGGTCAGATGTAGTTCAATGGAGTGGTACTGAAGGTGTTGATGGTAGACCCGGAGCTGATGGAAAACCAGGTGCTGATGGAAAACCAGGTGCTGATGGAAAACCAGGTGCTGATGGGCGGCCAGGAGCAGATGGGCAACGTGGTCCTGGAATGTACTCTCTTGCTATTGCTAATTTAACGGCATGGAATGATTCTCAGGCTAATTCGTTTTTTACATCTAACTTTGGTACTGGTCCTGTTAAATATGATGTATTAACTGAATATAAAAGTGGGGCACCAGGAACAGCGTTTACTAGGCAATGGAATGGTTCAGCATGGGCTAGTCCTGCAATGGTTTTACATGGTGATATGATAGTTAATGGTACGGTAACTGCTAGTAAAATTGTTGCTAATAACGCTTTCTTATCACAAATTGGTGTAAATATTATATATGATCGTGCAGCAGCACTATCCTCTAATCCAGAGGGATCTTACAAAATGAAGATAGACCTGCAAAACGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1566eb1a6d50d434332ff9a2785877795b3efdd7ec2c122a6881860abf25ed3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50