Protein

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Genbank accession
XPK42673.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALYPIKSLGAVGVIADQAPTDLAPNAFTNAINARFVEQRVFKTGGNAPLSYVEEDKEITPLSFISMPFDYYSAGNSFLVVGTDKKLYKLTDESLTDISRKVATVTKRASASIKIYPVVSQIVPKETSISMNFNQTKTLEVSVLPEDANNTSLVWEVSNSSYGKVEVDPSNPKIATLTSYEREGNLVVTVSTADESISAQIAVNIIDGDSGIFLSQDTITVRKGGNTTITAVTGKTPVTWTSSNNSILSITPNTNTLTASLFANGEGSVTVTADNGVKSASCQVNVIPQIDSITLSQTDVQMSRGTQYVLTATVNPSDAPNKTITWTSSNPNIATVSGNSTEAVITGLLAGFTEITAVTQEGNRAATCTVRVDLGGRMMRTSAMSFSEPMVKEVQSEVDNTYAPAETEEVLYFVSEPSGIDTSGMYEGNNFYDYSNVNDMEGFARAALLANDAPLQSLSLDIINASLDVGEDIVITANALPEGEYFYQWTVDKAGYVSTTSTTGKSLKLTAIRKGEIKVTCTASQMTQKDYDAFDDYPWYHTIISNCAVATTHYETPQVKEFESEYFVDLPGWGEQTVVDNDGNPSVKKFNWKCERIRAFNNRLFALNMRESNASGVTTHYPLRLRWSNFANENKAPSLWDDYAYDRLTTSDLSANIVGQTEALENGYAGYIDLADSNGSLIDVLPLKDYLFVYTEFETYIGSPTNNTYQPLMFKKLFNDSGILAPECAVEVEGGHFVVTQNDVILHNGASKKSIASNRVKNLLINEICLVNPLATRVHLHQDKKEVWVLYVGPGEPKESFACNKAAVWNYEFDTWSFRTIPYAQCIGLVDPPVLERGPIWADFQEITWDDPSINQLVWRKDANNFRQRITIVGSFLKGFYQVDVGALDYIYDRTNDRIIEKPLEMRLERTGIDFDNVTNEWNQKHINRFRPQVTGTGTYTFEVGGSQFSNEYGHNHSTKEFRVGSDRHVSVRLNHPYLFYNVIDNDVNSNASMNGLTIEFSVGGRR
Physico‐chemical
properties
protein length:1007 AA
molecular weight: 111304,91740 Da
isoelectric point:4,81832
aromaticity:0,09732
hydropathy:-0,28630

Domains

Domains [InterPro]
DC_0191
STR
41–1007
DC_0191
G3DSA:2.60.40.1080
STR
117–206
G3DSA:2.60.40.1080 IPR003343 IPR007110 IPR003343
IPR003343
STR
118–202
IPR003343 G3DSA:2.60.40.1080 G3DSA:2.60.40.1080
IPR003343
STR
289–369
IPR003343
IPR008964
RBD
290–372
IPR008964
IPR003343
STR
291–370
IPR003343
XPK42673.1
1 1007
Architecture
STR
STR 41-1007
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK42673.1
1 1007
Domain Start End Length (AA) Confidence
N-terminal 1 860 860 0,7682
Central domain 861 996 137 0,2522
C-terminal 997 1007 10 0,9896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-860
Central
861-996
C-terminal
997-1007

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage OliverMaurmann_Bas86
[NCBI] 		3398429 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK42673.1 [NCBI]
Genbank nucleotide accession
PQ850622.1 [NCBI]
CDS location
range 15418 -> 18441
strand +
CDS
ATGGCGCTTTATCCAATAAAATCTTTAGGGGCTGTAGGGGTTATTGCTGACCAAGCTCCAACTGATTTAGCACCTAATGCTTTCACTAATGCTATCAATGCCCGCTTTGTAGAGCAAAGAGTTTTTAAGACGGGGGGCAATGCCCCTCTTTCTTATGTAGAAGAAGATAAAGAGATTACACCACTCTCTTTTATCTCAATGCCTTTTGACTACTACAGTGCAGGTAATAGCTTTCTGGTTGTTGGTACAGACAAAAAGCTATATAAGTTGACAGATGAAAGCTTGACAGATATCAGCCGTAAGGTTGCCACTGTCACAAAAAGAGCTTCTGCTTCTATTAAGATTTATCCGGTTGTTTCTCAGATTGTTCCTAAAGAGACTTCCATTTCAATGAATTTCAACCAAACTAAAACTTTGGAAGTTTCTGTTCTTCCGGAAGATGCTAATAATACATCTCTGGTTTGGGAAGTCAGTAATTCCTCTTATGGTAAGGTAGAGGTTGATCCTAGTAATCCTAAAATTGCAACTCTAACTTCTTATGAAAGAGAGGGGAATTTAGTAGTCACTGTATCAACAGCCGATGAATCTATCAGCGCTCAGATTGCAGTAAACATTATAGATGGTGATTCTGGTATCTTCTTAAGCCAAGACACAATAACCGTTCGTAAAGGTGGTAACACTACAATAACTGCTGTTACTGGAAAAACCCCTGTAACTTGGACTTCTAGTAACAATTCAATCCTCTCCATCACACCGAACACTAACACACTAACGGCATCCTTATTTGCAAATGGAGAAGGCAGTGTTACTGTAACAGCGGATAATGGCGTGAAGAGTGCTTCGTGCCAAGTTAATGTTATACCACAGATTGACAGCATCACTCTAAGTCAGACTGATGTCCAAATGAGCAGAGGTACTCAGTACGTCCTGACTGCTACAGTTAATCCTTCAGATGCTCCTAATAAGACGATAACTTGGACTTCCTCTAACCCTAATATTGCTACAGTTTCCGGAAACAGTACAGAAGCAGTAATCACTGGACTACTTGCTGGGTTTACTGAAATCACAGCTGTTACCCAAGAAGGAAATAGAGCAGCAACTTGTACGGTAAGGGTAGACCTAGGTGGAAGAATGATGCGAACTTCTGCAATGTCTTTTTCGGAACCTATGGTTAAGGAGGTACAGTCAGAGGTTGACAATACCTATGCCCCTGCTGAAACAGAAGAGGTTTTGTATTTTGTAAGTGAGCCTTCTGGTATAGACACTTCAGGTATGTACGAAGGGAACAACTTCTACGACTACTCAAACGTCAATGACATGGAAGGTTTTGCACGGGCTGCACTTTTGGCTAACGATGCTCCTTTACAGTCGCTCTCTTTAGATATTATTAATGCATCCCTTGATGTTGGAGAAGACATTGTAATCACAGCTAATGCTTTACCTGAGGGAGAGTATTTCTACCAGTGGACAGTAGACAAAGCAGGTTATGTTTCAACTACATCTACTACTGGAAAATCTCTAAAACTGACAGCTATTCGTAAAGGTGAGATCAAAGTTACTTGTACTGCTAGTCAAATGACTCAGAAAGATTATGATGCTTTTGACGACTATCCTTGGTATCACACCATAATCTCTAACTGTGCAGTGGCTACCACTCATTATGAAACACCACAGGTCAAAGAGTTTGAATCTGAGTATTTCGTAGATCTTCCGGGATGGGGTGAGCAAACAGTCGTTGATAATGATGGCAATCCTTCTGTTAAGAAATTTAACTGGAAGTGTGAGCGTATTCGTGCATTCAACAACAGACTTTTTGCTCTGAATATGAGGGAATCTAATGCATCTGGTGTAACTACTCACTACCCTCTAAGACTTCGGTGGTCGAATTTCGCTAACGAAAACAAAGCTCCATCTCTTTGGGATGATTATGCTTATGATCGTTTAACAACTTCAGACCTATCAGCAAACATTGTTGGTCAAACTGAGGCTTTGGAAAATGGGTACGCTGGGTATATAGATTTAGCAGATTCTAACGGAAGTTTGATTGATGTACTTCCTCTGAAAGATTACCTTTTTGTTTACACGGAGTTCGAAACCTACATTGGTTCTCCAACCAATAACACATATCAGCCCCTTATGTTTAAGAAGCTGTTTAATGACTCTGGCATACTTGCTCCTGAGTGTGCAGTTGAAGTCGAAGGTGGACACTTCGTAGTAACTCAAAATGATGTGATCTTACATAATGGTGCATCTAAAAAATCTATAGCATCTAACCGAGTCAAGAATCTTCTCATTAATGAGATCTGTCTAGTAAACCCTCTAGCTACTAGAGTTCACCTACACCAAGACAAGAAAGAGGTTTGGGTTTTATATGTAGGTCCGGGAGAGCCTAAAGAGAGTTTTGCTTGTAATAAAGCCGCTGTTTGGAATTATGAGTTTGACACTTGGTCTTTCCGTACAATACCATATGCTCAGTGTATTGGGTTAGTCGATCCACCAGTTCTTGAGAGAGGTCCAATCTGGGCAGATTTTCAAGAGATCACTTGGGATGATCCCTCTATTAACCAATTAGTCTGGAGAAAGGATGCTAATAACTTCCGTCAAAGGATTACAATAGTTGGCTCTTTCCTGAAGGGATTCTATCAAGTGGATGTTGGTGCTCTGGACTACATCTATGATAGAACCAATGATAGGATTATAGAAAAACCTTTAGAAATGAGGCTAGAAAGAACTGGTATTGATTTTGATAATGTCACTAATGAGTGGAATCAAAAACATATTAATAGATTTAGACCTCAAGTTACTGGTACAGGTACTTATACTTTTGAAGTCGGTGGAAGTCAATTCTCAAACGAGTATGGACACAATCACTCAACTAAAGAGTTTAGGGTAGGCTCAGATCGTCATGTATCCGTGAGACTGAACCATCCATACCTATTCTATAATGTTATAGATAATGATGTTAACAGTAATGCTTCTATGAATGGTTTAACCATAGAGTTTAGTGTTGGCGGTCGAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd874eeecfa4c6306d121df7640b560338063a746217a7a799ae0c7da6a8e4d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7672
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank