Protein

View in Explore

Genbank accession

CAB3745662.1 [GenBank]

Protein name

Tail spike protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect

Probability 0,61

Evidence RBPdetect2

Probability 0,84

Protein sequence

MSKIIPNIVVSMPTQLFTLRRKFQACSNGKIYIGKSNTDPTIPTNQIQVYIENEDGSTVPVAQPIMINHAGFPVYNGQIAKFVTVESHSMAVYDSDGAQQFYFADILKYGPNRFKEQAAQYIAYIEKLKGTTTQTTGDSTTDVMSQKACTDTFAEKNSKEPLKAGRLNLESSNGDTIFNLGGTDGSAGSEFAYVKNSKRTQIYDTATQTTLLFPQKNGTLAVEEDTYTKTEVDAKINSVKWTTNKLANGWMKDPNTGIIIQWGYTSKENITGFYYPINFPTAFSSAVYSITTSSKAHDTRGHAMFIGIAYDVTTRGFNYYVRNLVDRLEKYMDGYYWMAIGV

Physico‐chemical properties

protein length:	342 AA
molecular weight:	38121,42670 Da
isoelectric point:	7,64509
aromaticity:	0,11988
hydropathy:	-0,39971

Domains

Domains [InterPro]

IPR009093
ATT
1–113

IPR009093 G3DSA:2.60.40.3940

IPR009093
ATT
1–105

IPR009093 IPR054075

IPR036730
ATT
2–111

IPR036730

IPR036730
ATT
7–109

IPR036730

DC_0777
STR
78–337

DC_0777

CAB3745662.1

1 342

Architecture

ATT

STR

ATT 1-113 | STR 114-341 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009093	ATT	DC_0597	1	113	InterPro cluster	Bacteriophage P22 tailspike, N-terminal	N-terminal	Medium	Text match	110 proteins / 110 hits
IPR009093	ATT	DC_0597	1	105	InterPro cluster	Bacteriophage P22 tailspike, N-terminal	N-terminal	Medium	Text match	110 proteins / 110 hits
IPR036730	ATT	IPR036730	2	111	Merged direct domain	Phage P22 tailspike-like, N-terminal domain superfamily	N-terminal	Low	Positional only	43 proteins / 43 hits
IPR036730	ATT	IPR036730	7	109	Merged direct domain	Phage P22 tailspike-like, N-terminal domain superfamily	N-terminal	Low	Positional only	43 proteins / 43 hits
DC_0777	STR	DC_0777	78	337	Novel HMM	DC_0777	Central	Low	Positional only	28 proteins / 28 hits
G3DSA:2.60.40.3940	RBD	G3DSA:2.60.40.3940	242	341	Merged direct domain	G3DSA:2.60.40.3940	C-terminal	Low	Positional only	77 proteins / 77 hits
IPR054075	RBD	DC_0717	255	341	InterPro cluster	Putative tail fiber protein gp53-like, C-terminal	C-terminal	Low	Positional only	174 proteins / 174 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Bacteriophage APSE-7 [NCBI]	568993	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

CAB3745662.1 [NCBI]

Genbank nucleotide accession

LR794149.1 [NCBI]

CDS location

range 34245 -> 35273
strand +

CDS

ATGTCAAAAATTATCCCCAATATTGTCGTGAGTATGCCCACTCAGTTATTTACGCTAAGACGAAAATTTCAGGCATGTTCAAACGGCAAAATCTATATCGGTAAAAGCAATACCGATCCAACAATACCAACGAACCAAATTCAAGTGTATATTGAAAACGAAGATGGCTCAACAGTGCCGGTTGCTCAACCCATTATGATTAATCACGCCGGGTTCCCGGTTTATAATGGACAAATCGCTAAATTTGTGACAGTCGAAAGCCACTCGATGGCGGTCTATGATAGTGATGGCGCCCAACAGTTTTATTTCGCTGACATATTGAAATATGGCCCCAATAGATTTAAAGAACAGGCTGCACAGTATATTGCGTATATCGAAAAATTAAAAGGAACGACTACACAAACGACCGGTGACTCAACAACCGATGTGATGAGCCAAAAAGCCTGTACAGATACTTTTGCGGAAAAAAATTCAAAAGAACCCCTCAAAGCTGGAAGACTTAACCTTGAATCCTCAAACGGTGATACGATTTTTAATCTGGGCGGTACAGACGGGTCAGCAGGTTCTGAGTTTGCGTATGTCAAAAATTCAAAAAGAACCCAGATTTACGATACAGCCACACAGACCACTTTATTATTTCCACAAAAAAATGGCACGCTGGCAGTAGAGGAAGATACCTATACAAAAACAGAAGTCGATGCAAAAATAAATTCAGTAAAATGGACAACAAATAAATTGGCAAATGGTTGGATGAAAGATCCGAATACGGGCATAATTATTCAGTGGGGATATACAAGTAAAGAAAATATAACAGGGTTTTATTATCCAATTAATTTTCCTACTGCATTTTCTTCAGCTGTATATAGTATAACGACGAGTTCTAAAGCGCATGATACACGCGGTCACGCTATGTTTATAGGGATTGCTTATGATGTAACGACAAGGGGATTTAATTATTATGTAAGAAATTTAGTTGATAGACTCGAGAAGTATATGGATGGTTATTATTGGATGGCGATAGGAGTCTAA

Genome Context

Tertiary structure

PDB ID

1343a28d71b4ba9f720e989e70229bb1f731107496652a9e72e817e397980227

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7984

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence