Protein

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Genbank accession
QIO02021.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESEINAKDSENLSANYANSSEASATQSATSATEAERQAGLSKDSADASAISASQSAASATKAAESSAAAKTSETNSLESSAAAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAALSATSASDSKGFRDEAEAFAAQASTSALAAKNSETNTKTSEINSKASEDAAKLAQQGASDSANTATQAMTTIQGLKSDVEQLKADTQTIKEGAAIEIGAAKTEAVGAIDTAKVNAIAEITPLKQAAEDAATLAGQKAVTATEQATAAAGSATTAGEQAVAASSSATRAETAANKAEQTLSISLLKDQNLADLSDKVQARINLSVDRLKQSADSSRIYDPTNRYNLVVMDTGSWGVYDDTNNVFKPLGISAGGTGAWDAEGARNNIGALSKGGDTATAMIATRHSYPAGSSGQILGWSWRSIVEGYGIGTATADFYVNHTVGSVTYACIKPTRVTGESWEYLFSDFGEMSNIRSLIISHNTGAPGEASGNLSLSYGAGRITQYAARVDFYDGTARSVLDTYDDTRLTTLLPSAGVICRRGIGGNYQANSYSFSWENPGVDVWIDSTRIGRVTLDPTSDIDYKEQVEPWEGKSALNNINQLELVTFIFKDDIKRRVRRGIIAQQAATIDPEYTHSSEDKEGNTILSLDTNVLLLDALAAIQVLSARVSKLESLLEDKPTTLPEDPAPNQDLP
Physico‐chemical
properties
protein length:755 AA
molecular weight: 78615,23090 Da
isoelectric point:4,71328
aromaticity:0,05033
hydropathy:-0,32874

Domains

Domains [InterPro]
DC_0608
ATT
2–206
DC_0608 DC_1675
Coil
Unmapped
250–270
Coil IPR030392
IPR030392
CHP
641–737
IPR030392
QIO02021.1
1 755
Architecture
ATT
STR
ATT 2-206 | STR 214-737 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIO02021.1
1 755
Domain Start End Length (AA) Confidence
N-terminal 1 416 416 0,9095
Central domain 417 615 200 0,2504
C-terminal 616 755 139 0,9825
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-416
Central
417-615
C-terminal
616-755

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage rutana
[NCBI] 		2713318 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus rutana
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIO02021.1 [NCBI]
Genbank nucleotide accession
MT074468.1 [NCBI]
CDS location
range 33421 -> 35688
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAATACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAATAAATGCTAAGGACTCTGAGAACCTATCTGCAAATTATGCTAACTCTTCAGAAGCTTCTGCAACTCAATCTGCTACTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCCGATGCCTCTGCTATTTCTGCTTCTCAATCTGCTGCGTCCGCTACTAAAGCTGCAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAACTCTCTAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTCTATCCGCTACCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATCAGATAGCGCGAACACAGCTACGCAAGCGATGACCACAATACAGGGTCTTAAGTCCGATGTTGAACAGCTTAAAGCTGACACTCAGACCATTAAAGAAGGTGCGGCAATAGAGATTGGAGCAGCTAAGACGGAGGCAGTAGGAGCAATTGACACAGCTAAGGTAAACGCAATTGCTGAAATCACCCCGTTAAAACAAGCTGCGGAAGACGCTGCCACCTTAGCTGGACAAAAGGCAGTAACAGCTACAGAACAAGCTACAGCCGCGGCTGGAAGCGCTACAACCGCAGGAGAACAAGCCGTAGCAGCATCCAGTTCCGCAACTCGAGCTGAGACCGCAGCAAACAAAGCTGAACAAACTTTGAGCATATCTTTGTTAAAGGATCAGAACCTTGCAGACTTAAGTGACAAGGTACAGGCTCGTATAAACCTAAGTGTAGATCGTCTTAAACAGAGCGCTGATAGTTCCCGCATTTATGACCCGACAAACCGCTACAACTTAGTTGTAATGGATACAGGGTCTTGGGGTGTGTATGACGACACGAACAACGTGTTCAAACCTTTAGGTATATCCGCTGGAGGTACAGGAGCTTGGGACGCAGAGGGTGCTCGCAACAACATTGGGGCGCTGTCCAAAGGCGGTGACACTGCGACCGCCATGATTGCTACTCGACATTCTTATCCTGCTGGCTCATCAGGTCAAATTTTGGGTTGGTCGTGGCGATCAATTGTAGAAGGCTATGGTATCGGAACGGCGACTGCTGATTTTTACGTAAACCACACAGTAGGAAGCGTCACATATGCCTGCATTAAGCCTACTCGAGTGACCGGTGAAAGCTGGGAGTATCTTTTTAGCGACTTTGGCGAAATGTCTAATATTAGAAGCCTGATTATTAGTCATAACACAGGAGCGCCAGGGGAAGCATCTGGAAATCTAAGTTTGAGTTACGGGGCCGGGCGCATTACACAGTATGCCGCTCGTGTAGATTTTTACGATGGAACTGCACGATCTGTTTTAGATACCTACGATGATACTCGCTTAACAACTCTCTTACCCTCGGCAGGTGTCATTTGCCGTAGAGGTATTGGTGGTAATTACCAAGCAAATAGCTATTCTTTCTCGTGGGAGAATCCGGGAGTCGATGTATGGATTGATAGTACTCGTATTGGGCGAGTAACGCTGGATCCTACAAGCGACATTGATTATAAAGAACAGGTTGAGCCATGGGAAGGTAAGAGTGCGTTAAACAACATCAATCAGTTAGAGCTCGTGACGTTTATCTTTAAAGATGATATAAAGCGTCGGGTACGTCGTGGAATCATTGCACAGCAAGCGGCAACCATAGACCCTGAATACACACACTCAAGCGAGGATAAGGAGGGAAATACAATTCTTTCGCTTGATACTAACGTGCTGTTACTGGATGCGCTTGCTGCTATCCAGGTGCTAAGCGCCCGTGTCAGTAAGTTAGAGTCTTTGTTAGAAGATAAGCCAACCACTCTACCTGAAGACCCCGCTCCAAATCAAGACCTTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7816de9a80d513165dc05b865098d8cb4c517d72c69fbe387e39b91e58a4f61
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank