Protein

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Genbank accession
QEA09431.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEVEVITGKSGGVASGADIDYATNAVTGQMQKTLPAVLRDAGFFPASFDFTTGGTLSTTDRNKVVYDPVSMAWYSWGGSLPKVVPAETNPLLDTNWKPQTDPNLRNDLENGMYRTDATAVKYVPGVVIDSTTDNRAALYAFPGKVYIPKDVQLRCNFLPDDDVTKFTGEGKILTRDPWGNEHIFDVSLATHGSKYTAFNVINQFARRNTLCRVGIVGDSITDGAYGTEWVANPTDSNGDLSSTNYDHNSNGGAGSWFRTFTDWLNRFTKNGAFIFKAENCASSGKRLIDGWANRNFDHGFFKNTAYGNVPPDVCFMSMGVNDNGQLNTLGFDQYLFRFEQFIRKAWGYGCAVCVVSMNQNGSQWAALEASIKKHIERLFPAVEFLDLSQAVTEMYRDVGSYTLEEICRRPTNGSFDYTHFAPLGHQYIGAYAATKVMPYRVHKATKGNNFLPVSPNDIQPFGYPSGSTYDVSMERLSGNSYLNGLTGWGVVEPATENLTIRYFVWCDTSDISMVIFEPYNPTYIGSRRANTVSIRQQDTRNTAYSSGNIASNGVSSFTNKLTTRTGILRKGLNQIEIVYDGTPSKVYPPALLFRGELNESCSQNASVYLAANAIKGVYGQVRDKADLLLAYGAETANDEAPDMYGATKSSNVQNVVLSALPVGCGVVFYYKPTSQSGVVAKRVATGIEISTMLFGALTVIGTLTCDVTGEVMLTAGLAPSVPTITVKPTTGGTVQQAVTGHSGGKIALINKGASGNTITVKSSSQFVI
Physico‐chemical
properties
protein length:790 AA
molecular weight: 85717,26030 Da
isoelectric point:6,24987
aromaticity:0,10506
hydropathy:-0,20646

Domains

Domains [InterPro]
DC_1596
STR
1–399
DC_1596 IPR054153 DC_1845
G3DSA:2.10.10.80
ATT
65–133
G3DSA:2.10.10.80 IPR049297 IPR036514
IPR040775
RBD
71–112
IPR040775 SSF52266
cd00229
ENZ
235–457
cd00229
QEA09431.1
1 790
Architecture
STR
ATT
STR
RBD
STR 1-64 | ATT 65-133 | STR 134-465 | RBD 483-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEA09431.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9931
Central domain 156 375 221 0,8911
C-terminal 376 790 414 0,6211
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-375
C-terminal
376-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Shashou
[NCBI] 		2580403 No lineage information
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEA09431.1 [NCBI]
Genbank nucleotide accession
MK931440.1 [NCBI]
CDS location
range 22348 -> 24720
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAGAAGCACCAGATTTTTGAAGTTGAGGTTATCACTGGTAAATCCGGCGGTGTCGCCAGTGGTGCGGATATCGATTATGCGACCAACGCGGTTACTGGTCAGATGCAGAAGACTCTCCCCGCCGTGTTGCGAGATGCGGGGTTCTTCCCGGCATCTTTTGATTTCACTACCGGCGGGACATTATCGACTACAGACCGCAATAAGGTCGTTTATGACCCAGTAAGCATGGCCTGGTATTCATGGGGTGGTTCTTTACCAAAGGTCGTCCCCGCGGAAACTAACCCGTTACTGGACACAAATTGGAAACCGCAAACAGACCCGAATCTACGCAATGACCTTGAAAATGGCATGTACAGAACGGACGCAACCGCCGTTAAATATGTCCCTGGGGTGGTTATAGATAGCACAACAGATAACCGGGCCGCATTGTATGCATTCCCTGGCAAAGTTTATATCCCAAAAGACGTCCAGCTACGCTGTAATTTCCTGCCAGATGATGATGTAACAAAATTTACTGGTGAAGGAAAAATTCTCACGCGCGACCCATGGGGTAACGAGCACATTTTCGACGTTTCACTGGCAACTCATGGGAGCAAATACACTGCATTCAACGTAATAAACCAGTTCGCTCGCCGCAATACGCTATGTCGTGTTGGTATCGTTGGTGACTCAATCACAGACGGTGCATACGGAACCGAATGGGTAGCCAACCCAACGGATTCAAACGGGGACCTGTCCTCGACTAATTATGACCACAATAGCAATGGTGGCGCAGGCTCCTGGTTCCGTACCTTCACGGACTGGCTTAACCGATTTACAAAAAATGGTGCTTTCATCTTTAAAGCAGAAAACTGCGCATCTTCTGGAAAGCGACTTATTGACGGGTGGGCTAATCGTAATTTCGACCATGGCTTTTTCAAAAACACTGCATACGGGAATGTTCCACCGGATGTCTGCTTTATGTCTATGGGCGTTAACGATAACGGCCAACTGAATACGTTAGGGTTCGATCAGTACTTATTCCGTTTTGAGCAGTTTATCCGTAAAGCATGGGGCTATGGATGTGCTGTCTGCGTTGTTTCAATGAACCAGAATGGCTCACAATGGGCGGCTCTCGAGGCATCAATCAAGAAGCATATTGAACGCCTGTTCCCCGCGGTAGAGTTCCTCGATCTCTCTCAGGCAGTAACTGAGATGTACAGAGATGTCGGTAGCTACACCTTAGAAGAAATTTGCCGTCGTCCTACCAATGGCTCTTTCGACTACACGCACTTTGCGCCCCTTGGTCACCAATATATTGGCGCTTATGCCGCGACCAAGGTTATGCCTTATCGCGTCCATAAGGCCACAAAAGGGAATAATTTCCTGCCGGTGTCGCCTAACGATATCCAACCATTCGGGTACCCTTCCGGCAGTACATATGACGTTTCTATGGAGCGACTTAGCGGAAATTCATACCTGAATGGGCTTACCGGATGGGGCGTGGTTGAGCCCGCTACTGAAAATTTAACCATACGATATTTTGTCTGGTGTGATACTTCTGACATATCAATGGTTATTTTTGAACCATATAACCCTACTTACATTGGTTCCAGGCGCGCAAATACTGTATCAATACGCCAACAAGATACCCGTAATACAGCATATAGCTCCGGTAATATCGCGAGTAATGGCGTCTCATCGTTTACGAACAAACTCACCACACGAACTGGAATCCTTAGAAAAGGACTGAATCAGATTGAGATTGTTTACGATGGTACGCCGTCGAAAGTATACCCTCCCGCTCTGTTATTCAGAGGAGAGCTGAACGAATCATGTTCTCAGAACGCCTCTGTATACTTGGCTGCAAATGCGATAAAGGGTGTTTACGGGCAGGTAAGAGATAAAGCAGATCTCTTATTAGCGTATGGTGCAGAAACAGCAAATGATGAAGCGCCGGATATGTACGGCGCTACTAAGTCATCAAATGTTCAAAATGTTGTCCTGTCAGCTTTGCCCGTTGGTTGTGGTGTTGTTTTTTACTACAAACCCACGTCACAAAGTGGAGTTGTCGCCAAGAGAGTGGCGACTGGCATCGAGATCTCGACGATGCTTTTTGGCGCACTTACTGTTATCGGCACCTTGACTTGCGATGTGACCGGCGAAGTCATGCTCACAGCCGGCCTGGCACCTTCAGTACCTACAATAACAGTTAAACCCACTACCGGCGGCACTGTTCAACAAGCTGTTACTGGTCACTCTGGCGGCAAGATAGCCCTGATTAACAAGGGGGCTTCCGGTAACACAATAACGGTTAAATCTTCATCTCAATTCGTCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d6c5b36f8c0492e3d224f18f973c47f8ef76243f0c201b00f8803ea48f0de7cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Siphophage Shashou Higbee,T., Yang,S.-H., Moreland,R., Liu,M. and Ramsey,J. — — GenBank