Protein

View in Explore
Genbank accession
YP_009032490.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MRLRGFPTDGQPAVSYVGTPTGSIVGTLQQLVGRIRVRAQHTGGLVSIPTETPRGVVGLSRQPDRLFAMPGQVGPQGPPGPEGDGLHIDGQVDSYAELPASAADGEVWIAGGLLYRYNGGWPDEASGAPVAGVQGPQGPQGPIGPQGPQGPRGFTGPEGPQGIQGPQGLQGPQGEQGPEGPQGPVGPQGPQGEIGPQGPQGEQGPQGIQGPQGAQGPQGPQGETGPQGPQGPQGEQGPPGPQGEEGPEGKSAYMVAALNGFLGTEQDWLDSLVGPEGPQGPEGPEGPQGPQGPQGPAGPQGDEGPQGPQGLQGPANTLSIGTVTSGTSASATITGTSPSQTLNLVLPKGDKGDKGDTGDQGPQGIQGPPGVPSSNGTVLDFVKMTQTEYNAATKVATTFYVIVG
Physico‐chemical
properties
protein length:404 AA
molecular weight: 40134,39360 Da
isoelectric point:4,29017
aromaticity:0,03960
hydropathy:-0,66683

Domains

Domains [InterPro]
IPR050149
Unmapped
70–372
IPR050149 IPR056923
DC_2298
STR
70–179
DC_2298 G3DSA:1.20.5.320 IPR008160 G3DSA:1.20.5.320
DC_0791
STR
165–217
DC_0791 DC_1725 DC_1769
YP_009032490.1
1 404
Architecture
STR
STR
STR 70-217 | STR 222-404
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Phantastic
[NCBI] 		1486426 Uroviricota > Caudoviricetes > Veracruzvirus >
Host Mycobacterium smegmatis str. MC2 155
[NCBI] 		246196 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009032490.1 [NCBI]
Genbank nucleotide accession
NC_024148.1 [NCBI]
CDS location
range 1617 -> 2831
strand +
CDS
ATGAGGCTGCGAGGATTCCCGACTGACGGACAGCCGGCGGTCTCCTACGTCGGCACTCCCACCGGTTCTATCGTCGGCACCCTGCAGCAGCTCGTTGGCCGCATCCGCGTCCGCGCCCAGCACACTGGCGGGCTGGTGTCCATCCCCACCGAGACCCCACGCGGTGTCGTCGGTCTGTCGAGGCAGCCGGATCGGCTGTTCGCGATGCCCGGTCAGGTCGGCCCGCAGGGGCCTCCCGGCCCGGAGGGCGACGGCCTGCATATCGACGGCCAGGTGGACAGCTACGCAGAGCTGCCCGCGAGCGCCGCAGACGGAGAGGTCTGGATCGCAGGCGGGCTCCTGTACCGATACAACGGTGGTTGGCCCGACGAGGCATCCGGAGCGCCCGTAGCGGGCGTCCAAGGCCCGCAGGGGCCACAAGGTCCCATCGGCCCACAAGGCCCGCAGGGACCCCGAGGATTCACCGGTCCAGAAGGCCCACAAGGCATCCAGGGACCGCAGGGTCTGCAAGGCCCACAAGGCGAGCAGGGTCCTGAGGGTCCCCAGGGTCCGGTCGGCCCGCAAGGGCCGCAGGGTGAGATCGGGCCGCAAGGCCCGCAGGGCGAACAGGGTCCTCAGGGCATCCAAGGTCCCCAGGGCGCGCAAGGCCCTCAGGGTCCGCAGGGCGAGACCGGCCCCCAGGGTCCTCAGGGTCCGCAAGGGGAACAGGGTCCCCCTGGTCCTCAGGGTGAGGAAGGCCCGGAGGGCAAGTCCGCGTACATGGTCGCGGCCCTGAACGGGTTCCTTGGCACCGAGCAGGACTGGCTGGACTCCCTCGTCGGCCCGGAAGGGCCGCAAGGTCCCGAAGGACCCGAAGGCCCCCAAGGACCGCAAGGTCCCCAAGGTCCTGCGGGACCCCAGGGCGACGAGGGACCGCAAGGACCTCAGGGCCTGCAGGGTCCTGCCAACACGCTGTCCATCGGCACGGTCACCAGCGGTACGTCTGCCAGCGCCACGATCACCGGCACGTCGCCCAGCCAGACGCTGAACCTGGTCCTCCCCAAGGGCGACAAGGGCGACAAGGGCGATACCGGAGACCAAGGGCCTCAGGGTATTCAGGGTCCTCCCGGCGTCCCGTCCTCGAATGGCACCGTCCTCGACTTCGTCAAGATGACCCAGACCGAGTACAACGCCGCCACCAAGGTCGCGACGACGTTCTACGTGATCGTGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d9fee5bf8b02ff19b15ab3b8366d005ef5be2788fab1b193a888204abc753711
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6638
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50