Protein

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Genbank accession
AFQ95957.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MLLDNDKQGALNYYDDLWTRQLTTGSSAFEFSVYKKTLLGDNPLNHKYHALNDQAFVSFVHKGKVQLFNIMQVEETETKIRCLCENLNLELLNEYCNAYKATKAMSFEEYLVEFDILNWGALTIGTNEVKDKKLTLEWTGQDTKLARLLSIANNFDAEVEFETQLHNNHTFKAFIVNVYKEYEEGKSYGVGRDRSDTVLRYQKNIAGITKKLDKRQIYNAIRPYGKKTVKGERVVSNPVTRKVTKTVGSNRTYLGGDIKYYGHTIKKANVQAIINYAVQYNILPSGIITQLYLESFWGDSTVGRRDNNWSGMTGSAQTRPSGVKVTTGMARPANEGGTYMHYASVDDFLKDYTYLLAKQGIYNVVGKKNIADYTKGLFRAGGAKYDYAAAGYQSYTNLMSNIRNGINKVTGNILNTIDALWQTPVQPITSINVARRATKTIQALNEATSLKGRRIGSGQCYALSGWYAKKLDGAWIDSSIGGIRGRIGGGMAAALIGTDYNWGAYGWKLDRSPNASNLQAGGLYNVKANFGAPFYTTQWGHTGIIKSVSKTRVTVLEQNYAGRMYVMENSYEINAFARGLQTVCYPREIAQGMSVNGATTQQVSGGTQISYEEVVQEAQTESYEEEQIIYIDNSIYKEWKDENGKVEYYLKNGFLYAPLSRDRYPSVLTGNETRDNWIRKDMEVETDSQEVLMSTGLKDLKAHAYPAVTYEVNGYVDLELGDVVRIQDDGYEPPLILTARVIEQEISITNPSSNKTKFSNFVEKESQLASDLISDMLRLYDESIPYEIKLATSNGVAFKNGTGESVLNPSLQKNGKDYEAVYFYKNGDSLIDIGPSLIVKASDFNHVLNITVEAYLNEELVASTQISFTDTEDGEKGDDGKSSWTAWANSEDGKVDFSITESKNRRFIGTYTGIEQSTNYLDYKWTDMVGTVVVGTNNLIDGTKSFFGTDWFTSATLEDENLSNYPFTLKKWISGQKVSHAKDIMVEQGVTYTFSAYVKREVAGNLYFYLYDIADGFITSDTPRETTIKNVDSNVRRFEITFTPTKTGKIRPRFAMIASEQGSFSSGGFMLVRGNKTGDWQESEADKASNLDSKADGDFTVEQLNKLAERARIAEAELQSKATLDTVNDWVKALQDEIKAREGGQKLSEQKLIDFSNRMIAVQQTIGEMQIRTDFVNKFMSQSEDGLVIGQKDGTSSVRVDNDRISFYSSGKEVAYIAQSVLVIDSGIFTTKLQIGRYRIEQYELNADINVVRYVG
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 140813,09140 Da
isoelectric point:5,60457
aromaticity:0,10748
hydropathy:-0,46107

Domains

Domains [InterPro]
DC_0558
ATT
1–387
DC_0558 IPR007921 G3DSA:2.60.120.260 Coil
IPR002901
ENZ
257–393
IPR002901 DC_0921
IPR002901
ENZ
271–386
IPR002901
G3DSA:3.90.1720.60
STR
363–585
G3DSA:3.90.1720.60
AFQ95957.1
1 1256
Architecture
ATT
STR
ATT 1-387 | STR 388-1256
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFQ95957.1
1 1256
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,9504
Central domain 249 449 202 0,6777
C-terminal 450 1256 806 0,0768
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-449
C-terminal
450-1256

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage LYGO9
[NCBI] 		1225805 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus agalactiae
[NCBI] 		1311 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFQ95957.1 [NCBI]
Genbank nucleotide accession
JX409894.1 [NCBI]
CDS location
range 12293 -> 16063
strand -
CDS
TTGCTTTTAGACAATGATAAACAAGGAGCACTTAATTATTATGATGATTTGTGGACTAGACAGCTCACAACTGGTTCGTCAGCCTTTGAGTTTTCAGTTTATAAAAAAACGCTGTTGGGTGACAATCCACTTAATCACAAATATCACGCACTAAACGATCAAGCATTTGTCTCTTTTGTACACAAAGGTAAAGTACAATTGTTTAACATCATGCAAGTCGAGGAAACAGAGACAAAAATACGTTGCCTTTGCGAAAATCTTAATTTAGAGTTACTCAACGAGTATTGCAACGCATATAAAGCAACTAAAGCGATGTCGTTTGAAGAGTATCTTGTAGAATTTGATATTTTAAACTGGGGTGCTTTGACAATTGGCACAAACGAAGTCAAGGACAAAAAACTCACTTTGGAATGGACTGGCCAAGATACTAAGTTAGCTCGCTTGTTATCGATTGCTAATAATTTTGATGCGGAAGTTGAGTTTGAGACGCAACTACACAATAACCACACATTTAAAGCTTTTATAGTAAACGTCTACAAAGAATATGAAGAAGGCAAGTCATACGGTGTTGGTCGTGACAGAAGTGACACTGTGCTTAGATACCAAAAAAATATCGCTGGTATTACTAAAAAGCTTGATAAGCGTCAGATTTACAACGCAATACGCCCTTACGGAAAAAAGACTGTAAAAGGTGAGCGGGTCGTCTCTAATCCTGTTACTCGTAAAGTCACTAAGACGGTCGGGTCAAATCGCACTTATTTAGGTGGTGACATTAAATATTACGGTCACACAATCAAAAAAGCAAACGTACAAGCGATTATAAACTATGCTGTACAATACAACATTTTGCCAAGCGGAATCATCACGCAACTTTATTTAGAGAGCTTTTGGGGTGACTCAACTGTCGGTAGGCGTGATAACAACTGGTCAGGAATGACAGGTAGTGCGCAAACTAGACCAAGTGGAGTCAAGGTTACAACTGGTATGGCTCGTCCCGCAAACGAGGGCGGGACATACATGCACTATGCAAGTGTAGATGACTTTTTAAAAGACTACACTTATCTCTTAGCAAAACAAGGGATTTATAATGTCGTTGGCAAAAAGAATATAGCTGACTATACAAAAGGGCTTTTTAGGGCTGGTGGCGCTAAATATGACTACGCAGCAGCAGGATATCAAAGCTACACAAATTTGATGTCTAATATCCGAAATGGTATTAATAAAGTAACCGGGAATATCCTTAATACGATTGATGCATTGTGGCAAACGCCAGTACAGCCTATAACTTCCATAAACGTGGCTAGAAGAGCCACTAAGACAATACAAGCGCTAAATGAAGCTACTAGTCTCAAAGGGCGTAGAATTGGCTCAGGGCAATGTTACGCTTTATCTGGCTGGTACGCTAAGAAGTTAGACGGAGCTTGGATTGATAGCTCTATTGGTGGTATCCGTGGTCGGATTGGCGGTGGTATGGCTGCTGCTTTAATCGGTACTGATTACAATTGGGGTGCTTATGGTTGGAAGCTAGACAGGTCGCCTAATGCTAGCAACTTGCAAGCAGGCGGTCTTTACAACGTTAAAGCTAATTTTGGTGCTCCATTTTACACAACACAGTGGGGTCACACTGGAATTATCAAGAGCGTTTCCAAAACTAGAGTCACAGTTTTAGAACAAAATTACGCTGGTCGCATGTATGTCATGGAAAACTCATACGAGATTAACGCTTTTGCTAGAGGATTGCAGACAGTATGTTATCCCCGCGAGATTGCGCAAGGAATGTCTGTCAACGGTGCAACAACACAGCAAGTGAGTGGTGGGACACAGATATCATATGAGGAAGTTGTACAAGAAGCACAGACAGAATCATACGAAGAAGAGCAAATCATCTATATCGATAACTCTATCTACAAAGAATGGAAAGACGAAAACGGTAAAGTAGAATACTATCTCAAAAATGGATTTTTGTACGCACCACTTTCAAGAGACCGCTATCCATCTGTTTTAACCGGTAATGAGACACGAGACAACTGGATACGAAAAGACATGGAAGTCGAGACTGATAGTCAAGAAGTCTTGATGTCAACAGGTCTAAAAGACTTAAAAGCACACGCTTATCCAGCTGTCACTTATGAAGTCAATGGATATGTTGATTTAGAACTTGGTGATGTTGTGCGAATACAGGACGACGGATACGAGCCACCGCTAATTCTCACAGCGAGGGTTATTGAGCAAGAAATATCCATAACAAATCCCAGCTCTAACAAAACTAAATTCAGCAATTTTGTCGAAAAAGAAAGTCAGTTAGCTTCTGATTTAATCAGTGATATGTTGCGTCTATACGATGAGTCAATTCCATACGAAATCAAACTAGCTACTTCGAATGGTGTCGCTTTTAAAAATGGCACTGGTGAATCTGTCCTAAATCCTAGCTTGCAAAAGAACGGGAAAGACTATGAAGCAGTTTATTTTTATAAAAATGGTGACTCGCTAATTGATATCGGACCATCGCTAATCGTTAAAGCAAGCGACTTTAACCACGTTTTAAATATAACAGTTGAGGCATATTTAAATGAGGAACTTGTAGCAAGTACGCAAATATCCTTTACAGATACTGAAGATGGAGAAAAAGGCGATGATGGTAAGTCATCATGGACAGCGTGGGCTAATTCAGAAGATGGAAAAGTTGATTTTAGTATAACTGAGTCTAAAAATAGAAGATTTATTGGAACTTATACTGGTATAGAGCAATCAACAAACTATCTTGATTATAAGTGGACTGATATGGTCGGAACAGTCGTTGTTGGCACAAACAATCTGATTGATGGTACAAAATCATTTTTTGGGACTGATTGGTTTACTTCTGCGACATTAGAAGACGAGAACCTCTCTAATTATCCTTTCACGCTTAAAAAATGGATTAGTGGGCAAAAAGTGTCGCATGCAAAAGATATCATGGTCGAGCAAGGTGTAACATACACCTTTAGCGCTTATGTTAAACGTGAGGTAGCTGGGAATTTATATTTTTATCTTTATGATATAGCAGATGGTTTTATTACTAGTGATACACCTAGAGAAACAACAATAAAAAATGTTGACTCAAATGTCAGACGCTTTGAAATCACCTTTACACCTACGAAAACAGGTAAGATTAGACCACGCTTCGCAATGATCGCTAGCGAACAAGGTAGTTTTAGCTCTGGCGGATTTATGCTTGTTAGAGGAAATAAAACAGGCGACTGGCAGGAATCAGAAGCTGATAAAGCAAGTAATCTTGATTCGAAAGCTGACGGTGATTTTACTGTCGAGCAGTTAAACAAACTTGCCGAACGTGCTCGCATTGCAGAAGCTGAATTGCAATCTAAAGCAACGTTAGACACAGTCAACGACTGGGTTAAAGCATTGCAAGACGAAATCAAAGCACGAGAGGGAGGACAAAAGTTATCAGAACAAAAACTGATAGACTTTTCTAATCGCATGATAGCAGTACAGCAAACAATTGGGGAGATGCAGATACGCACTGATTTTGTTAATAAATTTATGAGTCAGTCAGAGGACGGTCTTGTAATCGGACAAAAAGATGGAACGTCAAGCGTTAGAGTTGATAACGATCGCATCAGTTTTTACTCAAGTGGTAAAGAAGTAGCATATATAGCTCAGAGTGTGCTTGTTATTGATAGCGGTATTTTTACAACTAAACTGCAAATTGGACGTTATCGTATTGAGCAATACGAACTAAACGCTGATATTAACGTCGTAAGATATGTCGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7d939abee81751fdfa992eaf88e869017646e3af7711af5acbdae6475baa6a74
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence and Characterization of Two Virulent Phages of Bovine Source Streptococcus agalactiae Bai,Q., Zhang,W., Yang,Y., Tang,F., Nguyen,X., Liu,G. and Lu,C. 2017-09-13 — GenBank