Protein

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UniProt accession
A0A8S5R0M0 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MADKSINDLPAVESLADDGLLPVYQDGGAKRLTGALLAQYAEAAAKVQADAAAVSAQKAEAASNKPAYIGDNGNWYTWDNQAGNYADSGVAATGPKGATGSRGPTGPQGPTGPQGPQGPQGPAGPAGSGTGDMLAAVYDPAGGAKQVLFKGEVTASVSGKKLILTIPGVA
Physico‐chemical
properties
protein length:170 AA
molecular weight: 16678,25500 Da
isoelectric point:4,78933
aromaticity:0,05294
hydropathy:-0,27529

Domains

Domains [InterPro]
DC_1687
STR
5–167
DC_1687
A0A8S5R0M0
1 170
Architecture
STR
STR 5-167 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctPVE25
[NCBI] 		2826649 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE24643.1 [NCBI]
Genbank nucleotide accession
BK015779 [NCBI]
CDS location
range 8335 -> 8847
strand -
CDS
ATGGCTGACAAGAGCATCAACGATCTCCCGGCGGTAGAATCCCTGGCCGATGACGGTCTCCTGCCGGTATACCAGGATGGCGGAGCGAAGCGTCTCACCGGCGCTCTGCTTGCTCAGTATGCGGAAGCTGCCGCCAAAGTCCAGGCCGACGCCGCTGCCGTTAGCGCTCAAAAAGCGGAAGCTGCATCCAACAAGCCCGCGTACATCGGGGATAACGGCAACTGGTACACCTGGGATAATCAGGCTGGGAACTACGCTGATAGCGGCGTAGCGGCCACCGGCCCCAAAGGGGCTACCGGTTCACGCGGCCCCACAGGCCCGCAAGGCCCCACAGGCCCGCAAGGCCCCCAGGGGCCGCAAGGTCCGGCTGGTCCCGCAGGGAGCGGCACCGGCGATATGCTGGCAGCCGTATATGATCCGGCAGGCGGGGCCAAGCAGGTGCTGTTCAAGGGGGAAGTTACGGCATCGGTATCCGGGAAAAAACTCATTCTGACGATTCCGGGGGTGGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c1a5157e11befbef9ee31a401be25f2cfbe0f2bd12567cf7312243bdd72ba32
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7101
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50