Protein

View in Explore
Genbank accession
XNP00955.1 [GenBank]
Protein name
stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,51
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDPYFVTTVGQTSLQTASIAGLTYILNTEMAPNTTVDNTGRIDPSTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLIANGLPAGNVSVRGAYLFFYGLSNCVVSSDAGDTYAVVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFNYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNSDPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSAVLTPTNASISITSTYDCDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTAAQYTTQDATVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERNSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGAEYREAYSDLQKQVQVQDGVFTVPAVLRPVGWADRYKEELILTYLPSSPMGPTEVGIKEIAGENTLRVVHGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQTLRMDLATITVPCRTNADTTEVSLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 86076,41130 Da
isoelectric point:5,05875
aromaticity:0,08651
hydropathy:-0,25051

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
XNP00955.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNP00955.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9917
Central domain 147 345 200 0,1207
C-terminal 346 786 440 0,1039
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RothG
[NCBI] 		3384153 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNP00955.1 [NCBI]
Genbank nucleotide accession
PQ657833 [NCBI]
CDS location
range 32802 -> 35162
strand +
CDS
ATGGCGCAATCATTAGAAGGTACTATCCAGAGCTTGCTGCAGGGTGTCTCCCAGCAGGTTCCAAGAGAGCGCCAGCCCGGGCAACTGGGGGCGCAGCTGAATATGCTCAGCGACCCGGTTTCCGGTATCCGCCGTAGACCGCCGGGTGAGATTGTCTGGGAAAGCACAATCGATAACCCTGGGCTTGATTCCCTGTTCACTGAATACGTAGAGCGTGGGACTGACGGTAGGCACCTGCTGATTAACACCAGCAACGGTAACTGGTGGTTGCTGGCTAAGAATGGAAAGACCATCCTTAATTCCGGCAATGACCCGTACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCAAGTATTGCTGGATTGACTTATATCCTGAATACTGAGATGGCTCCGAACACAACCGTGGACAATACTGGGCGCATCGACCCCAGCACCACCGGGTTCTTCTACGTTAAATCCGCAGCATTCCAGAAACGCTGGAACGTCACCGTTACCTCTGCAGGGGTAGACTACTCTGGGGACTACACCGCCCCAGCTGCTGGCAGCACAAGCGGTAACGCTGAGGAGGTATCTGGTGCTTACGTTGCTCAGCAACTGCGTGACTCTCTTATAGCGAACGGGTTGCCAGCTGGGAACGTGAGCGTACGTGGCGCGTACCTGTTCTTCTACGGGTTGAGCAACTGCGTGGTATCCTCTGACGCGGGTGATACTTACGCTGTGGTGTCCAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTCCCAGCGCAAGCTGACGGAGCAATGTGCCGTGTGGGTACCGCCTCGTCTGAGACAGCATGGTACCAGTTCAACTACAGCACACGCACCTGGTCTGAGGTGGGGGCGTACGGCAGCATCACCAAGATTACGAACATGCCCAGAGAGCTCGCCGCAGATGACAACATCATCGCGCGGGATTGGGAGGGACGTTTAGCTGGCAACGACGACAACAACAGCGACCCCGGGTTCGTAGAGAACGGCTACATCACCGGAATTGCAGCTTTCCAGGGCCGCCTGGTTCTGCTTAGTGGTAGCTCCGTGGATATGTCAGCCTCTGGTCTGTATCAGCGCTTCTACCGTTCTACCGTGACTTCCCTGCTGGATACGGACCGTATCAGTATTAGCTCTGCGTCTGCCCAGGATTCTGTGTACCGCACCGCTGTGCAGTTCAACCGGGACCTGGTCCTGTTTGCTAACAGCATGCAGGCGGTTGTGCCGGGTTCGGCAGTACTTACGCCAACTAACGCAAGCATCAGTATTACCAGCACCTATGATTGTGACAGCCGTGTTACCCCAGTAATGGCTGGTCAGACAGTAATCTACCCGAACAAGCGCAACGACAGCTACGCGGGTATACTGGAGCTAATCCCATCACCTTACACCGCGGCGCAGTACACTACGCAGGATGCCACGGTGCACCTACCTCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGCAATAGCCTGCTGGTCTACGAGTTCATGTGGGGCGGAAGCGATGGCGCTAAGATGCAGGCAGCGTGGCACAAGTGGTCGTTCCCGTATCCAATCCTGAGCGTACAGGCGCTTGAGGATGAGGTGTTCTTGTACATGCAAGGGCCCAGTCCCAGTAACAAGCTCCTGATTGTGTCCATGGACCCGCGTGAAGGTTATCAGTTGGGTGCGGAGTACCGCGAAGCGTACTCGGATTTGCAGAAGCAAGTTCAAGTGCAGGACGGGGTGTTCACTGTTCCGGCAGTACTACGCCCAGTTGGGTGGGCCGACCGTTACAAGGAAGAGCTTATCCTAACGTACCTACCCAGCAGCCCTATGGGACCTACTGAGGTTGGCATCAAGGAGATTGCTGGGGAGAACACCCTACGGGTTGTGCACGGCGTACCTGATGGCACCTACGTAATCGGTAGACGTTACCGCAGTACGTTCACGCTAACTACACCTATTCTGCGGGACCAGAATGACAAGCTCGTGGGGAGTGGGCACGTGCGCCTGCTGCGCCTGGACGTAGCGGTGCGTAACTCTGGGCACTTCGACGTGCAGGTACTAGACACCCCACGAGACGTCAACTGGGGCGGGGAACTGACGGGTATACTGATGAACTCAAAGGAGCTGACGCTCGGGCAGACTCTGCGTATGGACCTGGCTACGATTACCGTGCCGTGCCGTACTAACGCAGACACAACCGAGGTGTCGCTATTTACTGAGGGCTCTATGGAACTAAACGTGCTGGATATTTCATATATCCTGCGCTACAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d51cae79fe19044497f34fae931c749164816afd145d4ab4e5cb8bdaa080629b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3091
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank