Protein

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UniProt accession
K7YB08 [UniProt]
Protein name
Putative pectate lyase
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSQSISSIMQLPVNMNFNKVVMVGRYAGIAGTTINGPDVAITNNYRLVVEQVSVNTQTIYQRLEYRLSGTVRVFGRFGTNSTGSDPLGGTWTFTTWEEFATPANGFTTTATVKAGRLESTGQVVGTYVGSTGRVVAATSVEGATATFTGVVTCSSVNQTSDQNLKKDITEIPPELIAAAKSVSPKQYRLKSDDTGALHVGFMAQEVWDAIVAVGLNPEDYALIGQHEDEDGGKFFSINYTELMLLRSL
Physico‐chemical
properties
protein length:248 AA
molecular weight: 26656,64600 Da
isoelectric point:5,09678
aromaticity:0,08468
hydropathy:-0,07258

Domains

Domains [InterPro]
DC_2091
STR
1–150
DC_2091 IPR036388
IPR036388
RBD
147–242
IPR036388
IPR030392
CHP
160–248
IPR030392
IPR030392
CHP
160–214
IPR030392
K7YB08
1 248
Architecture
STR
RBD
STR 1-150 | RBD 151-248
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage phiMAM1
[NCBI] 		1262513 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus MAM1
Host Serratia sp.
[NCBI] 		616 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Serratia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFX93507.1 [NCBI]
Genbank nucleotide accession
JX878496 [NCBI]
CDS location
range 37008 -> 37754
strand +
CDS
ATGAGCCAGTCAATTAGCAGTATCATGCAACTCCCGGTCAACATGAACTTCAACAAGGTTGTGATGGTCGGGCGCTATGCGGGGATAGCCGGGACGACAATCAATGGGCCAGACGTGGCCATCACCAACAACTATCGCCTGGTGGTTGAACAAGTCAGTGTAAACACACAGACGATCTATCAGCGCCTGGAGTACAGGTTGTCCGGCACGGTCAGGGTGTTTGGTCGCTTCGGCACCAACTCCACTGGCTCTGATCCTCTTGGTGGGACTTGGACGTTCACTACCTGGGAAGAATTTGCCACGCCAGCCAACGGCTTCACAACTACAGCAACAGTGAAAGCTGGGCGCTTGGAGTCTACGGGACAGGTGGTGGGGACGTATGTGGGTTCAACCGGGCGTGTGGTTGCAGCGACTTCTGTTGAAGGGGCGACGGCAACGTTCACTGGGGTGGTGACTTGTTCCTCAGTCAACCAGACTTCGGATCAGAACCTGAAGAAAGACATCACAGAGATACCACCAGAGCTGATTGCAGCGGCCAAATCCGTGTCTCCCAAGCAGTACCGTTTGAAGAGTGATGACACTGGCGCCCTGCATGTCGGGTTCATGGCACAAGAAGTTTGGGACGCCATTGTTGCTGTGGGGCTTAATCCAGAAGATTACGCGCTGATTGGCCAGCATGAGGACGAAGACGGCGGCAAATTCTTCTCCATTAATTATACTGAATTGATGTTGCTGCGCAGCCTCTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0016829 lyase activity Molecular Function IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
83ae353580980e6e29a324d2fab81ff5bc0b834f64c81dc6ac10039a745af028
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8273
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50