Protein

View in Explore
Genbank accession
BBI55760.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MKVLRKGDRGDEVCQLQTLLNLCGYDVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPMPTANKSRAAATPVMNAVENATGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTMIENYGMKYGVLTDPTGALRKDPRISALMGAELIKENMNILRPVLKREPTDTDLYLAHFFGPGAARRFLTTGQNELAATHFPKEAQANPSIFYNKDGSPKTIQEVYNLMDGKVAAHRK
Physico‐chemical
properties
protein length:260 AA
molecular weight: 28814,65140 Da
isoelectric point:9,09657
aromaticity:0,09615
hydropathy:-0,37500

Domains

Domains [InterPro]
G3DSA:1.10.101.10:FF:000016
Unmapped
1–70
G3DSA:1.10.101.10:FF:000016 G3DSA:1.10.530.10
IPR036366
ATT
1–78
IPR036366 G3DSA:1.10.530.10:FF:000045
IPR036365
RBD
2–73
IPR036365 IPR008258
IPR002477
CBM
9–65
IPR002477 IPR023346
BBI55760.1
1 260
Architecture
ATT
RBD
STR
RBD
ATT 1-78 | RBD 79-95 | STR 96-223 | RBD 224-260
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA02
[NCBI] 		2499142 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBI55760.1 [NCBI]
Genbank nucleotide accession
AP019418.1 [NCBI]
CDS location
range 77335 -> 78117
strand -
CDS
ATGAAAGTATTACGCAAAGGCGATAGGGGTGATGAGGTATGTCAACTCCAGACACTCTTAAATTTATGTGGCTATGATGTTGGAAAGCCAGATGGTATTTTTGGAAATAACACCTTTAATCAGGTAGTTAAATTTCAAAAAGATAATTGTCTAGATAGTGATGGTATTGTAGGTAAGAATACTTGGGCTGAATTATTCAGTAAATATTCTCCACCTATTCCTTATAAAACTATCCCTATGCCAACTGCAAATAAATCACGTGCAGCTGCAACTCCAGTTATGAATGCAGTAGAAAATGCTACTGGCGTTCGTAGCCAGTTGCTACTAACATTTGCTTCTATTGAATCAGCATTCGATTACGAAATAAAAGCTAAGACTTCATCAGCTACTGGTTGGTTCCAATTCCTTACTGGAACATGGAAAACAATGATTGAAAATTATGGCATGAAGTATGGCGTACTTACTGATCCAACTGGGGCATTACGTAAAGATCCACGTATAAGTGCTTTAATGGGTGCCGAACTAATTAAAGAGAATATGAATATTCTTCGTCCTGTCCTTAAACGTGAACCAACTGATACTGATCTTTATTTAGCTCACTTCTTTGGGCCTGGTGCAGCCCGTCGTTTCCTGACCACTGGCCAGAATGAATTAGCTGCTACCCATTTCCCAAAAGAAGCTCAGGCAAACCCATCTATTTTTTATAACAAAGATGGGTCACCTAAAACCATTCAAGAAGTTTATAACCTAATGGATGGTAAAGTTGCAGCACATAGAAAATAA

Genome Context

Genome Context

Tertiary structure

1 / 3
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Whole genome analysis of Pseudomonas aeruginosa PAO1 lytic phage PhiPA02 Ong,S.P., Miyanaga,K. and Tanji,Y. 2020-06 — GenBank