Protein

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Genbank accession
QGZ17691.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MSEIKTNKISPRKGTTTTITDSGDTVTVTSGANINNAGTLTINNLTNSGTITSSGTLTTAGISGSGTINNTTGSITGLQGAINWQTGSIKTTAFTASANEGYFCNTTSAAFTVTLPESPSAGDVIGLKDYADTFDTNNLTLNPNGNKIQGSTNNFLISVEGTAAILLYVDSTKGWLLVDQSKAADISQAALFTVATGGTITTSGDFKIHTFTGPGTFCVSQIGNAPTVPTGGPSNVDYLVVAGGAGGGCGGGGGAGGGGAGGHRTSFPSPSCNAGAFPVTATAFPITVGAGGTSAPYYGDPGNAGSNSVFSTITSAGGGGGGGHPSPTPNNPDGEAGGSGGGGAGFEEGPYRGCGGAGNTPPVSPPQGNPGGDGTQSPVGTGGAGGGAGGSGGNGGPTAGGAGGNGTANSITGSPVTRAGGGGGATGPAAKGGTPGPAGPGGGGAGGTRSSPNLAQSGTANTGGGGGGAACSSNGNGDGGSGVVIIRYKFQ
Physico‐chemical
properties
protein length:491 AA
molecular weight: 45821,82100 Da
isoelectric point:5,13025
aromaticity:0,05092
hydropathy:-0,20855

Domains

Domains [InterPro]
DC_0634
STR
68–405
DC_0634
IPR036240
STR
83–212
IPR036240 IPR049304
QGZ17691.1
1 491
Architecture
STR
STR 68-489 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17691.1 [NCBI]
Genbank nucleotide accession
MN698239 [NCBI]
CDS location
range 40462 -> 41937
strand +
CDS
ATGAGTGAAATTAAGACAAATAAAATTAGTCCAAGAAAAGGGACAACCACAACTATTACAGATAGTGGAGATACAGTTACAGTTACATCTGGAGCAAACATAAATAATGCAGGAACTCTAACTATCAATAATCTAACAAACTCTGGAACAATTACAAGTTCAGGCACTTTGACGACAGCTGGTATTTCAGGAAGTGGTACAATCAATAATACAACAGGATCAATTACAGGATTACAAGGAGCAATTAATTGGCAAACAGGATCTATAAAAACTACAGCATTTACAGCTTCAGCTAACGAAGGATATTTTTGTAATACTACATCAGCGGCTTTTACAGTTACACTACCCGAATCACCATCTGCTGGAGATGTAATTGGATTAAAAGATTATGCAGATACATTCGATACAAACAATTTAACTTTAAATCCAAACGGAAACAAAATTCAAGGTTCAACAAATAATTTTTTAATTTCTGTAGAAGGAACTGCAGCAATATTATTGTATGTAGATTCTACAAAAGGTTGGTTGTTAGTAGATCAATCTAAGGCAGCGGATATTTCTCAAGCAGCTTTGTTTACAGTTGCAACAGGTGGAACTATAACAACATCAGGAGATTTTAAAATACATACATTTACAGGTCCTGGAACTTTTTGTGTGTCTCAAATAGGAAATGCTCCAACAGTTCCAACAGGTGGTCCAAGTAATGTTGACTATTTAGTAGTAGCTGGAGGTGCTGGTGGAGGTTGTGGTGGTGGAGGGGGTGCTGGCGGAGGTGGAGCTGGTGGACATAGAACTTCTTTTCCAAGTCCATCTTGTAATGCTGGAGCTTTTCCAGTAACTGCTACAGCTTTTCCTATTACGGTAGGGGCTGGTGGAACTTCTGCTCCTTATTATGGTGATCCTGGTAATGCAGGTTCAAATTCAGTTTTTTCAACGATAACATCCGCAGGTGGTGGAGGTGGGGGTGGACATCCTTCTCCAACTCCAAATAATCCAGATGGTGAAGCAGGTGGTTCTGGTGGAGGAGGTGCTGGATTTGAAGAAGGTCCATATAGAGGATGCGGAGGTGCTGGTAACACTCCTCCAGTAAGTCCACCACAAGGTAATCCAGGAGGAGATGGTACTCAAAGTCCAGTTGGTACTGGTGGTGCTGGTGGAGGAGCTGGAGGAAGTGGTGGAAATGGTGGACCAACAGCTGGCGGTGCTGGTGGAAATGGAACAGCAAATTCAATTACTGGTTCTCCTGTTACAAGAGCAGGGGGAGGAGGTGGTGCTACAGGCCCTGCAGCTAAAGGAGGAACTCCAGGACCTGCTGGACCTGGTGGCGGTGGAGCAGGAGGTACAAGGTCTTCTCCAAATTTAGCTCAATCAGGAACAGCTAATACTGGAGGAGGTGGCGGTGGAGCTGCTTGTTCTAGTAATGGAAACGGTGATGGCGGTTCAGGAGTTGTTATTATTAGATACAAATTTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40f2c2b46c5f6ab23d379a5ff1fc5d943198bdba552ad5b663f33f97f803242f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank