Protein

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Genbank accession
YP_010767346.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MFPYETEFGTTILGVKDAYVSCPDGSHITCTIVTTGGHFGDKEVELPFTATPNDPMKHGVEIYNFLKKKKTTKKYVKPAPTLLELKDEFDELMVDITLGLASDEELARAKELRVQIKELSAV
Physico‐chemical
properties
protein length:122 AA
molecular weight: 13595,49330 Da
isoelectric point:5,18573
aromaticity:0,08197
hydropathy:-0,25574

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiPsa381
[NCBI] 		1460366 Uroviricota > Caudoviricetes > Vandenendeviridae > Otagovirus > Otagovirus psa381
Host Pseudomonas syringae pv. actinidiae
[NCBI] 		103796 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010767346.1 [NCBI]
Genbank nucleotide accession
NC_073684.1 [NCBI]
CDS location
range 54116 -> 54484
strand +
CDS
ATGTTCCCATATGAAACTGAATTTGGTACTACAATCCTTGGCGTTAAAGATGCTTATGTTTCTTGCCCTGATGGTAGCCACATCACTTGCACTATTGTAACAACTGGTGGTCACTTCGGTGATAAGGAAGTTGAGCTTCCATTCACTGCAACCCCAAATGACCCAATGAAACACGGTGTTGAGATTTACAACTTCCTCAAGAAAAAGAAAACCACTAAGAAGTATGTGAAGCCAGCTCCAACTCTGCTTGAACTTAAAGATGAGTTTGACGAGTTGATGGTTGACATTACCCTTGGTCTTGCTTCTGACGAAGAGCTTGCACGTGCTAAAGAACTAAGAGTTCAGATTAAAGAACTTTCCGCTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a16bc50b1788c96b8e1157613c170511c09db338281da0f5d56d4045e75b1f53
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8802
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas phiPsa374-like phages Warring,S., Malone,L.M., Easingwood,R.A., Rigano,L., Frampton,R.A., Lopez Acedo,E., Templeton,M.D., Kleffmann,T., Bostina,M. and Fineran,P.C. 2024-10 — GenBank