Protein

View in Explore
Genbank accession
UKM53785.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAGMVIHITDAGRAALVAGGNTGTAARRVVEIGLGTAPFAFDRGMKTMPNERKRVTTFGGENVAPDTVHVVIQDDTSDQYSLYAFGLYLDNGVLFAVYVQDAPILEKSPAAMMLLATDVVFATIDAAKLEFGPATFLNPPATTERKGVVELATQAEVDAGDDDTRAITPKTAKRRYAALSGATFDGRVRVFADVDDRAAQLDVSPKTAGVGKAGKARLFGTFGNATLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFASGGRVLIGERADDGKTALQVRGGVDASEGVAARAIDAGGAGGQFRAVYDGYGAFIRNDGRSVYFLSTPKGAPDGGFNDYRPFSWSLSTGQVIVDGSGAGTVFGGAVDVARDLEVGRQASEGHIKLGPVDGYLYANPVSTGWWSPAGSSYQYIFADHTFRIDGRMAWHEGNLDPLDKSKGGTLAGDVSFAPGKRLVLAEGSPAAPSLTFGNDGAPDTGLYHAADGEFGVACNARAVVRFSSSLVAFEQPVTVPTPPAADRSTRAATTEWVRTVLSATTIGQIVFEPRTTVRPGFLKANGVLVNRADYPELWAYAQASGALVSDADWMKDRWGCFSTGDGATTFRLPELRGEFIRCWSDARGGVDATRQIGAFQGDQNHTHAHGAAASEAPDHVHTAWTDVQGWHGHHGWTNAVGDHQHVSPWGEHPQMYNPPWGTWGAANNRGAEGSDNDNVYGMTSPAGNHNHEFNTEGNGNHGHAVGIGGGGRHAHAIAVQPDGGDEARPRNVALLALIRAY
Physico‐chemical
properties
protein length:790 AA
molecular weight: 83355,29100 Da
isoelectric point:5,69268
aromaticity:0,08861
hydropathy:-0,28278

Domains

Domains [InterPro]
DC_0662
STR
115–695
DC_0662 DC_1872
IPR048390
ATT
295–359
IPR048390 SSF88874
IPR037053
ATT
552–631
IPR037053
UKM53785.1
1 790
Architecture
STR
ATT
STR
ATT
STR
STR 115-294 | ATT 295-359 | STR 360-551 | ATT 552-631 | STR 632-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage PhiBP82.2
[NCBI] 		2914172 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia pseudomallei
[NCBI] 		28450 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKM53785.1 [NCBI]
Genbank nucleotide accession
OM304382.1 [NCBI]
CDS location
range 14452 -> 16824
strand +
CDS
ATGGCAGGAATGGTCATCCACATTACCGACGCCGGCCGCGCGGCCCTGGTCGCCGGCGGCAACACCGGCACGGCCGCGCGCCGCGTCGTCGAAATCGGGCTCGGCACCGCGCCGTTCGCGTTCGATCGCGGCATGAAGACGATGCCGAACGAGCGCAAGCGCGTGACGACGTTCGGTGGCGAAAACGTCGCGCCGGACACGGTGCATGTCGTGATCCAGGACGACACGAGCGATCAGTATTCGCTGTACGCGTTCGGCCTGTATCTCGACAACGGCGTGCTGTTCGCCGTGTACGTGCAGGACGCGCCGATTCTCGAAAAATCCCCCGCGGCGATGATGCTGCTCGCGACCGATGTCGTTTTCGCGACGATCGACGCAGCCAAGCTCGAGTTCGGGCCGGCGACGTTCCTGAATCCGCCGGCGACGACCGAGCGCAAGGGCGTGGTCGAGCTCGCCACGCAGGCCGAAGTGGACGCCGGCGACGACGACACGCGCGCGATCACGCCGAAGACGGCGAAGCGGCGCTACGCGGCGCTCTCGGGCGCGACGTTCGACGGGCGCGTGCGCGTCTTCGCCGATGTCGACGATCGCGCCGCGCAGCTCGACGTGTCGCCGAAGACGGCCGGCGTCGGCAAGGCCGGCAAGGCGCGCCTGTTCGGCACGTTCGGCAACGCGACGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTGCGCGCGGGATTCGACGCCGGCGCGTGGGGGCGCGAATACGTCGACGTTTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGACGCGAAGCAGAAGCGCGTCGCACGCTTCGCGTCGGGCGGCCGCGTGCTGATCGGCGAGCGCGCGGACGACGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCATCGGAAGGCGTCGCCGCACGCGCGATCGACGCCGGCGGCGCCGGCGGGCAGTTCCGCGCCGTGTACGACGGCTACGGCGCGTTCATCCGCAACGACGGCCGGAGCGTCTATTTCCTGTCGACACCGAAGGGGGCCCCGGACGGCGGCTTCAATGACTATCGGCCGTTCTCGTGGTCGCTGTCGACAGGGCAGGTGATCGTCGACGGCAGCGGAGCGGGCACGGTCTTCGGCGGCGCCGTGGACGTCGCGCGCGACCTCGAAGTCGGTCGGCAGGCAAGCGAAGGGCATATCAAGCTCGGGCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGTTGGTGGTCGCCGGCGGGATCGTCCTATCAGTACATCTTCGCCGATCACACGTTTCGCATTGACGGGCGGATGGCGTGGCACGAAGGCAACCTCGACCCGCTCGACAAGAGCAAGGGCGGCACGCTGGCCGGCGATGTGTCGTTCGCGCCGGGCAAGCGGCTCGTGCTCGCCGAAGGCAGCCCGGCCGCGCCGTCGCTCACGTTCGGCAACGACGGCGCGCCGGATACCGGCCTCTATCACGCAGCCGACGGCGAGTTCGGCGTGGCCTGCAACGCGCGCGCCGTCGTGCGGTTCTCGTCGTCGCTCGTGGCCTTCGAGCAACCCGTGACCGTGCCGACGCCGCCGGCGGCGGATCGATCGACGCGCGCCGCGACGACGGAATGGGTGCGCACGGTTCTGTCGGCGACGACGATCGGCCAGATTGTCTTCGAGCCGCGCACGACCGTACGGCCGGGCTTCCTCAAGGCGAACGGCGTGCTCGTGAACCGTGCCGACTATCCCGAGCTGTGGGCGTATGCGCAGGCGAGCGGCGCGCTCGTCTCCGATGCGGACTGGATGAAGGATCGGTGGGGCTGTTTCTCGACCGGCGACGGCGCGACGACGTTTCGCCTGCCCGAGCTGCGCGGCGAATTCATTCGTTGCTGGTCCGATGCGCGCGGCGGCGTCGATGCGACGCGCCAAATCGGCGCCTTCCAGGGCGACCAGAACCACACGCACGCACACGGCGCCGCGGCAAGCGAAGCGCCGGACCACGTCCACACCGCGTGGACCGACGTGCAGGGCTGGCACGGCCACCACGGTTGGACGAACGCTGTGGGCGACCACCAGCACGTCTCGCCGTGGGGCGAGCACCCGCAGATGTACAACCCGCCGTGGGGCACGTGGGGCGCCGCCAACAACCGCGGCGCGGAGGGCAGCGACAACGACAACGTGTACGGGATGACGAGCCCGGCCGGCAACCACAACCACGAATTCAACACCGAAGGCAACGGCAATCACGGGCACGCCGTCGGTATCGGCGGCGGTGGCCGGCACGCGCACGCGATCGCCGTTCAACCCGACGGCGGCGACGAAGCGCGCCCGCGCAACGTCGCGCTGCTCGCGCTGATTCGCGCCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79969b34561467cf6db3f56f036a98f0e8f5e6ec074e33539ec8429a5e107874
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7551
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A comprehensive study of prophage islands in Burkholderia pseudomallei complex (BPC) Khrongsee,P., Irby,I. and Tuanyok,A. 2024-04-29 — GenBank