Protein

View in Explore
Genbank accession
URP85456.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQVARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDNFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGSGTGLKDNTTSFVEVVFDEFSDIGVTGIPERMLDDPQTYSGNGYPFKAYGVWNVGSDVSRNDIFKITADIYIDQAARNAGAECYLYAFTHIASGQWISSTVLRTTGLAADTWHSVSGYYTIPDNADITRLGVSAYHYPSTVTAGQARCRNIQFCKVPREEVNRNGAAIGVNGIRMQTLSEVTDAGTVNPIEQLLSLPVSPVGVISDKKISSHNFAELDYIVSDPTEYTSTNTAEYQFKEWTATQQAAVTKASLSSYGIKPGDTIRMQCQMKRDATAIANSKGAYIVMQFWDANNTYISGINMRDVGTIPNVYSFYKNEGVIPAGAVMFDFGLYRYPNNTSTGSMSAKDVNLSIVR
Physico‐chemical
properties
protein length:529 AA
molecular weight: 58013,36180 Da
isoelectric point:5,41968
aromaticity:0,10964
hydropathy:-0,18110

Domains

Domains [InterPro]
DC_0004
STR
1–529
DC_0004
PS52031
LEC
24–206
PS52031
IPR039477
STR
62–132
IPR039477
URP85456.1
1 529
Architecture
STR
STR 1-529
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URP85456.1
1 529
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,2233
Central domain 50 248 200 0,6205
C-terminal 249 529 280 0,4324
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-248
C-terminal
249-529

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EC-W1
[NCBI] 		2662274 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URP85456.1 [NCBI]
Genbank nucleotide accession
MN508621.2 [NCBI]
CDS location
range 43999 -> 45588
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAATGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATAAACAGACGAACACAAGTTGCTCGCGGAATTAACCTGGCTGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAAGCATTCGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCTATCAAAAGTGATGACAACTTTTTAGCAACAATGAGGAAAATTGGTTCTGTTGCATGGCCTGAAACTCGGTTCTTTAATATCCCGATCACCACAACCAACTATTCTCACCGTTCATCCTATTCAGCTATCTATTCATCAACGATGAAAAAGATTTGCATGGAAAACTTTGTCGGTGGTTCTGGTACGGGGTTGAAAGACAATACAACGAGTTTTGTTGAAGTGGTATTTGATGAATTCAGCGATATTGGAGTAACTGGTATTCCTGAAAGAATGCTGGATGATCCTCAAACGTATAGCGGTAATGGTTATCCATTCAAAGCATACGGGGTTTGGAACGTTGGGAGTGATGTTTCTCGTAATGATATTTTCAAAATCACTGCGGACATCTATATCGATCAGGCTGCACGTAATGCGGGGGCAGAATGTTATCTGTATGCCTTTACTCATATTGCGTCTGGACAGTGGATATCATCAACAGTTCTTAGAACAACTGGACTTGCTGCGGATACATGGCATTCGGTATCGGGATATTACACTATTCCAGATAATGCTGATATAACTCGTTTGGGTGTTTCTGCTTATCATTATCCGTCAACAGTTACCGCTGGTCAGGCCCGATGTCGAAATATCCAATTCTGTAAAGTCCCTCGCGAAGAGGTGAACAGAAACGGGGCGGCTATCGGTGTCAATGGTATTAGGATGCAAACACTTTCCGAAGTCACTGATGCTGGAACCGTAAACCCGATTGAACAATTGCTTTCTCTGCCTGTTTCGCCTGTTGGGGTTATCAGTGACAAGAAAATTAGTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGACTGAATATACTTCTACCAATACAGCGGAGTACCAGTTCAAAGAATGGACTGCTACCCAGCAAGCGGCGGTAACGAAAGCATCACTAAGCAGTTATGGAATAAAACCTGGTGATACGATCCGTATGCAATGCCAAATGAAACGTGATGCAACAGCAATCGCAAATAGTAAGGGCGCGTACATCGTAATGCAGTTCTGGGATGCAAACAATACGTATATCTCTGGAATTAACATGCGTGATGTTGGCACGATCCCGAACGTATATTCATTCTACAAAAACGAAGGGGTTATTCCTGCTGGTGCTGTTATGTTTGATTTCGGTTTATATCGTTATCCAAACAACACAAGCACAGGTTCGATGTCCGCTAAAGACGTTAATCTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
549e056f50cae38d1414714b5b6f56fa56b220934f4457c6fe71edcd93c83a49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Constructing and Characterizing Bacteriophage Libraries for Phage Therapy of Human Infections Gibson,S.B., Green,S.I., Liu,C.G., Salazar,K.C., Clark,J.R., Terwilliger,A.L., Kaplan,H.B., Maresso,A.W., Trautner,B.W. and Ramig,R.F. 2019 — GenBank