Protein

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UniProt accession
A0AAE8C8M1 [UniProt]
Protein name
Pectate lyase superfamily protein domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALTNLTKPRARWMTFKSKLVGAIQRAIADKLMDATSVKDFGAKGDYLLEDGSVNPNPTNDTSAFIAALATGKNIYVPRSQYYVPDSTLLVATNGQSIYGDGAWASVLVTEGAQSVILVSANYTNLKGFGTRAIGRLAADAHGIEVGNRTGGGGSRCSLTDVLTDRHGGDGLRINDGNLGTLHDIISLSNGGHGVHFTDENPDNNAWNQTGRVDLRGNLGNGFHIPSGSGASDPNASKSHNFTFICAQQNVGYGLYIGTRSNIINYYSEANTGGSAFLANDDGAEGNLINAVEGGSPAEQGTNTTSNNNILTDNNFDARYARIFRNMFMENSFIVERRGNAGKLTVEVDETTQRKFNVKGWGSGGGGWLMDFTAGATGDEGGMSLKALSLNAETYSTPRICTDGSIINIGSTNAAVLKNTAPITSNGVSGWRAGKVFTVKCDGVTTISGSNVHRKAGSLATPAAGTILMFVCDPETTNRIVEIGTSV
Physico‐chemical
properties
protein length:487 AA
molecular weight: 51164,14140 Da
isoelectric point:6,08856
aromaticity:0,07187
hydropathy:-0,26427

Domains

Domains [InterPro]
DC_2184
STR
5–483
DC_2184
IPR012334
STR
7–471
IPR012334
A0AAE8C8M1
1 487
Architecture
STR
STR 5-483 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0AAE8C8M1
1 487
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,9176
Central domain 60 327 269 0,9481
C-terminal 328 487 159 0,9491
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-327
C-terminal
328-487

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 15E36.1
[NCBI] 		2859290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098996 symbiont entry into host cell via disruption of host cell glycocalyx Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
2f9dc2e9ac29f9fbd04e86909082a1e98a05adee9ea5523dea2b896e45a1e532
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7180
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50