Protein

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UniProt accession
A0A8S5PVH9 [UniProt]
Protein name
Neck appendage protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MQINFNTTRFDILPTDESYRYRSIMGEHTLTLYFSLPTYTDIPTGAWCEFQGERYTLNQPAKVVKHNTHHFEYTLTMDSEGANLRNYKFRNPNDKTLKFPFTASPRYHIQILVDCLNMIDSGWTLGTTIEAPEKLISYNHNNCLEALDMIAKAFETEYEIIGKTIHLHKVEYFKNNPLPLQYGKGKGFKTGVSRTTEQSRITRLYVQGGERNIDRSKYGNKELLLPKSQEYTYEGVTFVSDDKGLSIAIKNAQNNGFINEQSLDLSHIYPKRKGRVSAVFEVDKAKHFYDFTDTTIPQALNFWDMRINGEKMLIYFESGMLSGREFEVQKYDHTQKRFQLVPKEEDGVTMPNDIFKPAIGDEYSVYNMQMPNAYICDNATQSGASWEMMKEACKYLYENRADLFIFTGDLDGIWAKKHWANVGGRLKMGAYIHFSDTEFQRTPVAIRIVGLKEYVNNPYSPQIELSNKVQGQSFATEIRKLQNQEVYFGELNKRTLSETKRSWRNALETIKQVEEAFPEYTKSIIPATVQTMMALVGNKSGQFVFVANKTNPITVPHTLYFDRNNKQLNAGSGWIKHYALGTNDIKPNYSAADYKYWYAPAFISGRLDDKAKTYYLYIKASKVVETAQFVLSETKIDIEQEAGYYHFLYATVNSEYNGERGIAQLNGFTEITGGQIVTSKISSGNGEQFIQLLDKEIIIKANLHITEGNKTEIKQLVNPDLQLLENRLKQYSNEQTNNIRVGGRNLLRNSGRKITNSDYLIARYKLTDKTLKEGERVTLTIKGQLGAGKQSFLIHNTDGWITLTNLIDKGNGIYQNTFNWTFSGNGRTIYENEAVNIYTYMSHVQVNSTIEWIKLERGNHATDWSPAPEDTESRIDQEKQTREQDVATAKAATEAYARTQSELTKAQAIAEANKQAGIAITAEQQTRILQLQQNLQQAKNFAEQKVNELQVGGRNYILKSNDFITNGYKFLGISSLFGNEIVKNDNITLSVDIMFKNLTKEGRLGIEFNIIYTDNTEVYYNVWKWLNNRDIGTSFTERMVNIIQNNHKGKKIKYISSLGLYIQCEAESVKVSNPKIEIGNKPTDWSPAAEDIENKVADIQTDLQNAINNAKALIAVETQNRQQTDTNVSKLVNKTNFLSDTYIEGNTMATGTMILGNSLGVQAGITGVGAANNDVRLWAGSNYKDRSKAPFHVLQDGTLHATNAHISGQIEAQSGKISGNLELLGVLYSGNWEREIVNGKETIKGENVNGGTYYGGRGIIYRQDDRGIYTAIGGVAGSVTGVTESMNVISRKPLYPKSKYNLSSFTGQILSVPPHPNDEIDVSLGYKNNRAQTIYGDTVSFGANSLFEYVYTGVADSGTIHEWLGVTNIFVFSDVASNFREIYLPNASIVVSILSKFGFENISRKELSLSFEITIVLSYSVGGKRIRLSGIEGGYLLDNDGNRFGGGNGYVDLARGDAIKVRYYSGDYYTMVISRNS
Physico‐chemical
properties
protein length:1477 AA
molecular weight: 166666,41540 Da
isoelectric point:6,98167
aromaticity:0,10562
hydropathy:-0,48693

Domains

Domains [InterPro]
DC_1023
STR
425–941
DC_1023 Coil
DC_2057
STR
874–1127
DC_2057
Coil
Unmapped
928–952
Coil
A0A8S5PVH9
1 1477
Architecture
STR
STR 425-1127 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5PVH9
1 1477
Domain Start End Length (AA) Confidence
N-terminal 1 781 781 0,9518
Central domain 782 1015 235 0,3865
C-terminal 1016 1477 461 0,2043
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-781
Central
782-1015
C-terminal
1016-1477

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctRNB7
[NCBI] 		2825502 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE10768.1 [NCBI]
Genbank nucleotide accession
BK015520 [NCBI]
CDS location
range 28801 -> 33234
strand +
CDS
ATGCAAATCAATTTCAATACCACTCGCTTCGATATACTCCCCACTGATGAGAGTTACCGTTATCGCTCTATAATGGGCGAACATACCCTCACCCTATACTTTTCATTACCCACTTACACCGACATTCCTACCGGTGCGTGGTGCGAGTTCCAAGGCGAACGGTACACCCTCAATCAGCCCGCCAAGGTAGTGAAGCATAACACTCACCACTTCGAGTACACCCTTACTATGGACAGCGAGGGCGCAAATCTACGTAATTACAAGTTCCGTAACCCCAACGATAAGACCCTCAAATTCCCCTTCACAGCCTCACCACGCTACCATATTCAGATATTGGTAGATTGTCTCAATATGATAGATAGCGGATGGACGCTCGGAACTACTATTGAAGCCCCCGAAAAACTCATCTCCTACAACCATAACAACTGCCTCGAAGCCTTAGATATGATAGCCAAAGCCTTTGAAACTGAATACGAAATCATAGGCAAAACCATACACCTTCACAAGGTAGAATATTTTAAAAACAATCCCCTACCACTACAATATGGCAAGGGCAAAGGCTTTAAAACAGGCGTAAGTCGTACCACTGAACAAAGTCGTATCACACGCTTATACGTACAAGGAGGCGAACGCAATATCGACCGCTCTAAGTACGGCAATAAAGAACTCCTACTACCCAAATCACAAGAGTACACCTATGAAGGCGTAACCTTCGTTTCAGACGACAAAGGGCTATCAATAGCCATCAAGAACGCCCAAAATAACGGCTTTATCAACGAACAAAGCCTCGACTTATCGCATATATACCCCAAGCGCAAAGGAAGGGTTTCAGCAGTCTTTGAAGTAGATAAAGCCAAACACTTCTACGACTTCACCGATACCACCATACCTCAAGCCCTCAACTTTTGGGATATGCGCATCAATGGCGAAAAGATGCTTATCTACTTTGAAAGCGGTATGCTTTCAGGGCGTGAGTTTGAAGTACAGAAATACGACCACACCCAAAAACGCTTTCAGCTTGTCCCCAAGGAAGAAGACGGCGTTACTATGCCTAATGATATATTCAAGCCAGCTATAGGCGATGAGTATTCCGTCTATAATATGCAAATGCCTAATGCCTATATTTGCGACAACGCCACCCAATCAGGAGCCAGTTGGGAAATGATGAAAGAAGCCTGCAAATACCTATACGAAAACCGCGCTGACCTCTTCATCTTCACCGGCGATTTAGACGGCATTTGGGCAAAAAAACATTGGGCTAATGTAGGTGGACGGCTTAAAATGGGCGCATATATCCACTTCTCCGACACCGAATTTCAGCGTACCCCCGTAGCTATTCGTATCGTGGGGCTCAAAGAGTATGTAAATAACCCATACAGCCCACAAATAGAGCTATCCAACAAGGTACAAGGGCAATCCTTCGCCACCGAAATACGCAAACTCCAAAACCAAGAAGTATATTTCGGCGAACTCAACAAACGTACCCTATCCGAAACCAAACGCAGCTGGCGCAACGCCTTAGAGACTATAAAGCAGGTAGAAGAAGCCTTTCCCGAATACACCAAGAGCATCATTCCTGCCACTGTACAGACGATGATGGCATTAGTAGGCAATAAGTCAGGGCAATTTGTCTTTGTGGCCAATAAGACCAACCCTATCACCGTACCTCATACCTTGTACTTTGATAGGAACAACAAGCAACTCAATGCAGGCAGCGGTTGGATAAAGCACTACGCATTAGGTACAAACGACATTAAGCCCAATTATTCAGCAGCGGACTATAAATATTGGTACGCACCGGCCTTTATCTCTGGCAGGTTAGACGATAAGGCAAAAACCTATTATCTATATATCAAAGCAAGCAAAGTCGTAGAAACCGCCCAGTTTGTCCTATCCGAAACCAAGATAGATATAGAGCAAGAAGCCGGCTATTACCATTTCCTATATGCCACCGTCAATTCCGAGTACAATGGCGAGCGAGGTATAGCCCAGCTCAACGGCTTTACCGAAATCACAGGCGGACAAATAGTAACCAGTAAAATCAGCTCAGGGAATGGAGAACAGTTTATCCAACTCTTAGACAAAGAAATTATCATCAAAGCCAACCTCCACATCACCGAAGGTAACAAAACCGAAATAAAACAACTCGTTAATCCTGATTTGCAGTTGTTGGAGAATAGACTCAAGCAGTATTCTAATGAGCAAACGAATAATATAAGGGTTGGGGGTAGAAACTTGTTGCGAAATAGTGGTAGAAAAATAACCAACAGCGATTATCTTATAGCAAGGTATAAACTAACAGATAAAACGTTAAAAGAGGGAGAAAGAGTAACCTTGACAATCAAAGGGCAATTAGGGGCAGGAAAGCAAAGTTTTTTAATACACAATACAGACGGCTGGATTACTTTAACTAATTTAATAGATAAAGGAAACGGCATATATCAAAACACTTTTAACTGGACCTTTTCAGGTAATGGGAGGACTATTTATGAGAATGAAGCGGTTAATATATATACGTATATGTCCCATGTGCAAGTAAATAGCACTATAGAATGGATTAAACTTGAAAGAGGAAACCATGCCACCGATTGGTCTCCCGCTCCTGAAGATACAGAAAGTAGAATAGACCAAGAAAAACAAACACGTGAACAGGATGTCGCTACTGCTAAAGCCGCTACAGAAGCCTACGCTCGTACCCAATCTGAACTCACTAAAGCCCAAGCCATAGCAGAGGCTAATAAGCAAGCAGGCATAGCCATAACAGCTGAGCAGCAAACACGTATTTTACAACTCCAACAAAACCTACAACAAGCTAAAAACTTTGCCGAGCAAAAAGTAAATGAGTTGCAAGTAGGAGGACGTAACTATATATTAAAGTCAAATGATTTTATCACTAATGGATATAAATTTCTTGGTATATCTTCCTTATTTGGTAATGAAATTGTAAAAAACGACAACATTACATTATCTGTTGATATAATGTTTAAGAATCTCACAAAAGAAGGACGTTTGGGTATAGAGTTTAATATAATTTACACAGATAATACTGAAGTATATTATAATGTATGGAAGTGGTTAAATAATAGAGATATAGGCACTTCATTTACTGAAAGAATGGTTAATATCATTCAAAACAATCATAAAGGAAAAAAAATAAAATATATATCATCATTAGGATTATACATACAATGTGAGGCTGAAAGCGTTAAAGTTTCTAACCCAAAAATAGAAATAGGCAACAAACCCACCGACTGGTCTCCAGCTGCTGAAGATATTGAAAACAAAGTTGCAGACATTCAAACAGACCTACAAAACGCTATCAACAACGCCAAAGCCCTTATAGCAGTCGAAACCCAAAACCGCCAACAAACAGACACCAATGTATCAAAGTTAGTCAACAAAACCAACTTCCTAAGCGACACATACATCGAGGGCAACACTATGGCTACAGGCACTATGATACTCGGCAACAGTTTAGGCGTACAAGCAGGCATTACAGGTGTAGGTGCAGCCAATAATGATGTACGCTTATGGGCAGGAAGCAACTACAAAGATAGGTCTAAAGCCCCTTTTCACGTACTCCAAGACGGCACCCTACACGCTACCAATGCCCATATATCAGGACAAATAGAAGCACAAAGTGGTAAAATAAGTGGTAATTTAGAACTTTTAGGAGTTTTATATTCAGGGAATTGGGAAAGAGAAATCGTAAATGGGAAAGAGACTATTAAAGGTGAAAATGTAAATGGAGGCACTTACTACGGAGGTAGAGGTATAATATATCGTCAAGATGATAGAGGTATATATACTGCTATAGGTGGAGTAGCTGGAAGTGTAACTGGAGTAACAGAATCGATGAACGTTATTAGCAGAAAACCTCTTTATCCAAAATCAAAATATAATTTAAGTAGTTTTACAGGTCAAATATTATCAGTACCACCACACCCTAATGATGAGATAGATGTTTCTTTAGGTTATAAAAACAACCGCGCTCAAACCATATATGGTGATACTGTTTCATTTGGAGCTAATTCGTTATTTGAATACGTATATACTGGTGTAGCAGACTCAGGTACTATACACGAATGGTTAGGAGTTACCAATATATTCGTATTTAGCGATGTAGCATCAAACTTCAGAGAGATATATTTACCAAACGCATCTATAGTTGTTAGTATATTAAGCAAATTCGGATTTGAAAACATTAGTCGTAAAGAACTATCTCTATCCTTTGAAATCACTATTGTATTATCATACTCTGTAGGCGGTAAACGAATACGCCTATCAGGTATAGAAGGAGGTTACCTATTAGATAATGATGGCAACCGTTTTGGAGGAGGTAATGGTTATGTAGATTTAGCAAGAGGAGATGCTATAAAAGTAAGATATTATTCAGGAGATTATTATACAATGGTAATATCTCGTAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0d1918c2f76cff432a193026ff0e6d5a7502e257d158de833fab1be7dbf8d45
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50