Protein

View in Explore
Genbank accession
QNR51838.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MPSLIIRYPLDLTGRSTNNLVQAEPHNIGATSASRKNRVIVPKYGAFYTEGLRVRVKSTGKVLEPKTQYVCTEFYQDASVVTGLEVCCAIVITDTLVPSDLEIFYQVVGGEFSVSAGALQDAIDNLNIDNRPVYWGDIIGLPETFAPSDHLHDIGDLYGFEYLIPVLENMVTAILTGSGAVEDAIMAHVNNKISQLDGRIATMRGLFDEHANDEDNPHKVTKGQVGLGNVSDYPIASDVEATNGGSNQRYMTPAGVSLRVNAILDQRLEAHLQDKQNPHAVTKAQVGLGSVLNYAIATQGEAEDGTSSTRYMTPQRTAQAVKKQVGDLFTSHANDFGNPHKVTKAQVGLNFVQNYPIATEQEALAGERDDRYMTPLLVRYMVNQISGELTGGHVTNYDNPHRVSKAQVGLGSVQDYPIATQQQAESGDINTAYMTPARTKQAIAAQMTDVVGQHSSRKDNPHEVTKAQVGLGSVQNYAIANTQEALEGSLNTRYMTPSLVKAVVGDFKATVFDPFAARTDNPHKVSKAQVGLGSVQDYGVATTAEMQAAGRLEATAVNNKYVTPLGVRTAMATYDNDVVGPHIGNLDNPHQVTKAQVGLGSVLNYAVASEQEAIAGELNTRYMTPLRVKQFVMPLISGGVDGHANRKDNPHEVTAAQVGAYTTGEVDSRLARKLDTSLYSGKRGQVLFTDEDNGDPGASLSRVVSRLGIVLNDSELASMQGDADDPTELVNTYRRVSINAEGEPNGDAADNAAWTYNTTTTRTENSRTSPRVVGLLSNETFDDFDFEVLVDSRSATKGLVGLVIGAVDDGGIIRTITVTRTPGGSLGFAAGLTTQHVPAGNTTAPMALMGIQYDLGQRDSKLIKSTNKLKWGDGVQSDTRRLNGSEITGNTGWAYQLGGCRIRVTRVGKVFTVRTTDFILDSTGSATIQPGDARLKNYVAAAQLSFSVDDLPELSVFDGPVSIGYMGLNNPSRFLYDSLPGSRPTIIDGRTGAVQQWSGSGWAPSDLSADELILPGRMYNNQITGRLFAGLGDGSFEEVKIFGSASADMDLLIASLTESFNDAATDLG
Physico‐chemical
properties
protein length:1068 AA
molecular weight: 114527,46000 Da
isoelectric point:5,10706
aromaticity:0,06554
hydropathy:-0,27931

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp14
[NCBI] 		2769337 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNR51838.1 [NCBI]
Genbank nucleotide accession
MT939492.1 [NCBI]
CDS location
range 122301 -> 125507
strand -
CDS
ATGCCCTCGCTCATCATTCGTTATCCCCTGGACCTGACCGGGCGGAGCACGAACAATCTGGTTCAGGCGGAGCCGCACAACATCGGTGCGACGTCGGCGAGCCGGAAGAATCGTGTCATCGTCCCCAAGTACGGCGCCTTCTACACCGAAGGCCTGCGGGTCCGCGTCAAATCCACCGGCAAGGTTCTGGAACCCAAGACGCAGTACGTGTGCACCGAGTTCTATCAGGATGCCTCGGTCGTCACGGGTCTGGAAGTCTGCTGCGCCATCGTCATCACCGACACCCTCGTCCCCTCGGATCTGGAGATCTTCTACCAGGTCGTGGGCGGTGAGTTCAGTGTTTCGGCCGGCGCGCTGCAGGATGCCATCGACAACCTCAACATCGACAACCGTCCGGTGTACTGGGGCGACATCATCGGCCTGCCCGAGACGTTCGCTCCGTCGGACCACTTGCACGATATCGGCGACCTCTACGGCTTCGAGTACCTGATCCCCGTTCTGGAGAACATGGTCACTGCGATCCTGACCGGTTCCGGTGCCGTGGAAGACGCCATCATGGCGCACGTCAACAACAAGATCTCGCAGCTGGACGGTCGCATCGCGACCATGCGTGGTCTGTTCGACGAGCACGCCAACGATGAAGACAACCCGCACAAGGTCACCAAGGGTCAGGTCGGTCTCGGCAACGTGTCCGACTACCCCATCGCCTCGGACGTCGAAGCGACCAACGGCGGCAGCAACCAGCGCTACATGACCCCTGCGGGCGTGTCGCTGCGTGTCAATGCGATTCTGGACCAGCGCCTGGAAGCGCACCTCCAGGACAAGCAGAATCCGCATGCAGTCACCAAGGCGCAAGTCGGTCTGGGTAGCGTGCTGAACTATGCCATCGCCACGCAGGGTGAAGCCGAAGACGGTACGTCCTCCACTCGCTACATGACGCCCCAGCGTACCGCGCAGGCCGTCAAGAAGCAGGTGGGTGATCTGTTCACGTCCCATGCCAACGATTTCGGTAATCCGCACAAGGTGACCAAGGCGCAGGTTGGCCTGAACTTCGTGCAGAACTACCCGATCGCAACCGAGCAGGAAGCTCTGGCTGGTGAGCGTGACGATCGCTACATGACGCCGCTGCTGGTTCGCTACATGGTCAATCAGATCAGTGGCGAGCTGACCGGTGGTCACGTGACCAACTACGACAACCCGCACCGTGTCTCCAAGGCGCAGGTGGGTCTGGGGTCGGTCCAGGATTACCCGATCGCAACGCAGCAGCAGGCTGAGTCCGGTGACATCAACACGGCCTACATGACCCCGGCGCGTACCAAGCAGGCCATTGCTGCACAAATGACGGACGTCGTCGGTCAGCACTCCAGCCGCAAGGACAACCCGCACGAAGTGACCAAGGCACAAGTGGGACTGGGCTCTGTCCAGAACTACGCGATTGCCAATACGCAGGAAGCGCTGGAAGGTTCGCTGAACACGCGGTACATGACGCCTTCGCTGGTCAAGGCCGTCGTCGGCGATTTCAAGGCCACGGTCTTCGATCCGTTCGCTGCACGTACCGACAACCCGCACAAGGTTTCCAAGGCGCAAGTCGGTCTGGGTTCCGTGCAGGACTACGGCGTTGCTACCACCGCAGAAATGCAGGCGGCAGGTCGTCTGGAAGCCACGGCGGTCAACAACAAGTACGTGACGCCGCTGGGTGTTCGCACGGCGATGGCCACGTACGACAACGACGTGGTCGGCCCGCACATCGGCAACCTGGATAACCCCCATCAGGTGACGAAGGCTCAGGTTGGTCTGGGCTCGGTTCTGAACTACGCAGTCGCATCCGAACAGGAAGCGATCGCCGGTGAACTGAATACCCGTTACATGACCCCGCTGCGCGTCAAGCAGTTCGTCATGCCGCTGATCTCTGGCGGTGTGGATGGTCACGCCAACCGCAAGGACAACCCGCATGAAGTGACGGCCGCTCAGGTCGGCGCTTACACCACGGGCGAGGTCGACTCTCGCTTGGCCCGCAAGCTGGACACTTCGCTGTACTCCGGCAAGCGTGGTCAGGTGTTGTTCACGGATGAAGATAACGGTGACCCGGGTGCTTCGCTGAGCCGTGTCGTGAGCCGTCTGGGCATCGTGTTGAACGATTCCGAGCTGGCCTCGATGCAGGGCGATGCGGACGACCCGACCGAGCTGGTCAACACCTACCGTCGTGTGTCCATCAACGCCGAAGGTGAGCCCAATGGTGACGCTGCCGACAACGCAGCGTGGACGTACAACACCACGACCACTCGTACCGAGAACAGCCGCACCAGTCCGCGTGTGGTCGGTCTGCTGTCCAATGAGACCTTCGATGATTTCGATTTCGAAGTGCTGGTTGACAGCCGTTCGGCAACCAAGGGCTTGGTCGGTCTGGTGATCGGCGCCGTGGACGATGGCGGCATCATCCGCACCATCACCGTGACGCGTACCCCGGGTGGTTCGCTGGGCTTCGCTGCTGGTCTGACCACGCAGCACGTTCCTGCCGGCAACACCACCGCTCCGATGGCGCTGATGGGTATCCAGTACGATCTGGGTCAGCGCGACAGCAAGTTGATCAAGTCGACCAACAAGCTGAAGTGGGGCGATGGCGTCCAGAGCGACACCCGTCGCCTCAACGGCAGCGAGATCACCGGCAACACTGGCTGGGCCTACCAGCTGGGCGGCTGCCGTATCCGTGTCACCCGTGTCGGCAAGGTCTTCACTGTCCGCACCACCGACTTCATCCTCGACTCCACCGGCTCCGCTACCATCCAGCCGGGCGATGCGCGCTTGAAGAACTACGTGGCAGCTGCGCAGCTCTCGTTCTCCGTGGACGATCTGCCGGAACTGTCCGTGTTCGATGGTCCGGTCAGCATCGGCTACATGGGTCTGAACAACCCCTCTCGTTTCCTGTACGACTCGCTCCCGGGTTCGCGTCCGACCATCATCGATGGCCGTACCGGCGCCGTGCAGCAGTGGTCGGGTTCGGGCTGGGCACCTTCGGATCTGTCGGCCGATGAACTGATCCTGCCGGGTCGCATGTACAACAACCAGATCACCGGGCGCCTGTTTGCTGGCCTGGGCGACGGTTCGTTCGAGGAAGTCAAGATCTTCGGTTCTGCAAGTGCCGACATGGACCTGCTGATCGCAAGCTTGACCGAATCGTTCAACGACGCAGCAACCGATCTGGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5ac7fa6b4517e5cd372220c4d6c8b9fbc574a0322fe63a6895294d3090f0edcc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5364
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Sequence analysis of novel giant bacteriophage, Xoo-sp14 Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2020-11-25 — GenBank