Protein

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Genbank accession
YP_012892858.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MIKLARDGYSDEDIKAVLHGKQGSRSVSFRYELLDKNNIFKAHLYNVLEGSSIDYGVFNEIKRTAKFTLQEQPALNIDYMSDRIRPYMILDMPAINKMFNGKIRYIRDWANGSTFNEHNHWCEIQAYTKDGTNVALNKPVTGSSAFHSSGPAQRATDGIISATGNYAEIQNPNTPSYVIVDLESVMEVEKIKVWHYYNGTRTYHQTKTEVSVDGVNWIVLFDSAVSGEYVETAAGKEHMVRTRINKPKGKIEFPLGIFMLASPNRDSNDRGIVRSIDAYDLSLILHDDFVDDHYTVPKGTNYKKAIIDVLQSAGITEYNIEDTDKVAGRDLQFEIGTPKIKIVNSLCDNINFIPIIVDINGVFTSYSYVLPQNRPVEYTYEDNDLSIIMRGVSEELDTFSIPNRWIVVRTNSEEEPLRSVYTNTNPDSPTSTVNRGRIIVDYRELEDIADQAALDRHAKMVADNASQIFGKVKFNSAIMPMHDYHDLIEFKFSKLGVSEKFTETAWTLPLEAGGVMSHELRRVIQI
Physico‐chemical
properties
protein length:526 AA
molecular weight: 59663,57960 Da
isoelectric point:5,46873
aromaticity:0,09696
hydropathy:-0,37985

Domains

Domains [InterPro]
IPR008979
STR
129–230
IPR008979
G3DSA:2.60.120.260
STR
132–251
G3DSA:2.60.120.260
IPR000421
RBD
140–229
IPR000421
YP_012892858.1
1 526
Architecture
STR
STR 129-251 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012892858.1
1 526
Domain Start End Length (AA) Confidence
N-terminal 1 83 83 0,8161
Central domain 84 289 207 0,3750
C-terminal 290 526 236 0,6166
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-83
Central
84-289
C-terminal
290-526

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_BceS_LY5
[NCBI] 		2996058 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus cereus
[NCBI] 		1396 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012892858.1 [NCBI]
Genbank nucleotide accession
NC_112270 [NCBI]
CDS location
range 17049 -> 18629
strand +
CDS
ATGATTAAACTAGCAAGAGATGGATACTCAGATGAGGATATAAAAGCAGTATTACATGGGAAACAGGGCAGTCGCTCTGTTTCTTTCCGTTATGAATTATTAGACAAGAACAATATATTCAAAGCTCACCTGTACAATGTTCTGGAGGGATCATCTATTGATTACGGCGTATTCAACGAGATCAAGCGAACAGCTAAATTTACACTGCAAGAGCAGCCTGCCTTGAATATCGACTACATGAGTGACCGGATCAGGCCCTATATGATTTTAGATATGCCAGCCATTAACAAAATGTTTAACGGTAAGATCCGTTATATTAGAGACTGGGCAAACGGTAGTACGTTCAATGAACATAATCACTGGTGCGAGATACAGGCCTATACGAAAGACGGAACAAACGTAGCATTGAATAAACCGGTAACAGGAAGCAGTGCTTTTCATAGTAGCGGCCCAGCTCAAAGAGCTACAGATGGGATTATCTCGGCTACGGGTAACTATGCAGAAATACAAAACCCTAACACGCCTAGTTATGTGATCGTGGATCTGGAGTCTGTAATGGAAGTTGAGAAAATAAAAGTATGGCATTATTACAATGGTACGAGAACATACCATCAAACGAAAACAGAGGTATCTGTGGACGGCGTGAATTGGATCGTACTATTTGATAGTGCTGTATCAGGGGAGTACGTAGAGACAGCAGCAGGAAAAGAGCATATGGTGAGAACTAGGATTAACAAACCTAAGGGCAAAATTGAGTTCCCGCTGGGTATCTTCATGCTAGCCAGCCCGAACAGAGACAGCAATGACAGAGGGATCGTTCGAAGTATAGACGCTTATGACTTATCTCTGATCCTGCATGACGACTTTGTGGACGACCACTACACAGTGCCAAAGGGAACGAACTATAAGAAAGCTATTATAGATGTGCTGCAGAGTGCAGGGATCACAGAGTACAATATAGAAGATACAGACAAGGTAGCGGGAAGGGATCTTCAGTTTGAAATCGGTACGCCTAAAATAAAGATCGTCAACTCGCTGTGCGACAACATAAACTTTATACCTATCATTGTAGACATAAACGGCGTATTCACTTCTTACTCATATGTATTACCGCAAAACAGGCCAGTGGAATACACCTATGAAGATAATGACCTATCCATTATTATGCGTGGTGTATCAGAGGAGCTGGACACGTTCAGCATACCTAACCGCTGGATCGTTGTTAGAACAAACTCAGAAGAAGAGCCTTTGCGTTCCGTCTATACAAATACCAACCCTGACTCGCCTACAAGCACAGTAAACAGAGGCCGTATTATCGTGGATTACAGGGAGCTGGAAGATATAGCGGATCAGGCCGCACTGGACAGGCACGCTAAAATGGTAGCCGATAATGCCTCTCAGATATTCGGAAAGGTGAAATTCAACTCTGCTATTATGCCTATGCATGACTATCATGATCTGATTGAGTTCAAATTTAGTAAGTTAGGTGTATCAGAGAAATTTACGGAAACAGCTTGGACTCTGCCGCTAGAAGCTGGAGGCGTTATGTCTCATGAACTAAGGAGGGTGATCCAGATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f44506727b24c44e1e2446cbf0ffbb6b7b4185dbef29b84602988fd5a2115611
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50