Protein

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Genbank accession
AKN44337.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MNLVGYTATALSRNDIEDTPTNKNVVDFAIVELKDLQGNLVVMYDDAEGLNPEKQKICDTDGQVTFFAEIGDYDLEINGKAQRINLSSGLASFISTKTDESVQDFVDSFALKIFQSPTDGGLTEIQTRTVDAGEVYEVRKTSDDSLATIYSDAAGTTEILQDGTDNKSGSDGVVEFYISNGDYYIDYNSVSSGFSASHNSVYESTLSQKVSSLISRGDARIAILGDSTEAGVGNGSGNAYGECRSSANGSHFTMSHFDLISKDKNFIPLDPSSYQLSPPLSGPLPIGLASSWVIIGSDNPTITQRVRAKNANNITSFTVYILERTSDAAPAFDVTIRAPVSNVTKTETVDTYTPAVTFGDAGTVNVAGRLVAKTFSWTGTNIDYDTLDIKIDNFRGVGGAAGTGTALIFGFAFNDGVKLKNFAVSSTTLEDNSPANQARGVTTTGRIDEAVAWGANCFFLGWGTNDSKDGGLSLGSFYEEYRGQIEYIKAQVPDSTICLCTDPKGSGVYINNVKYNELVRQLARSERLCLFDVENLAQSIDGFYDDDVHPSSSGYLGLSKSINKLCTPIDESNTVSYKLASGFYTQNILGGLSDLTGSFVEVASIATSRPSDKNLLDINVNISYYLASGDLEQSEIKILINGSQIRSVRFNILQGVASATWDCKEVREIYQSGNLDTYVISVELKNYSTRDLPNSSWVNARWI
Physico‐chemical
properties
protein length:703 AA
molecular weight: 75954,02870 Da
isoelectric point:4,47706
aromaticity:0,09246
hydropathy:-0,22404

Domains

Domains [InterPro]
DC_0934
STR
12–505
DC_0934
IPR036514
STR
345–565
IPR036514
SSF52266
STR
411–562
SSF52266
cd00229
ENZ
412–555
cd00229
IPR013830
ENZ
422–555
IPR013830
AKN44337.1
1 703
Architecture
STR
STR 12-565 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKN44337.1
1 703
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,9902
Central domain 217 415 200 0,5555
C-terminal 416 703 287 0,7086
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-415
C-terminal
416-703

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage Pq0
[NCBI] 		1667322 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas sp. Bq0
[NCBI] 		1678126 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKN44337.1 [NCBI]
Genbank nucleotide accession
KR060090.1 [NCBI]
CDS location
range 28093 -> 30204
strand -
CDS
ATGAATTTAGTTGGATACACAGCAACGGCATTAAGCCGAAACGACATAGAGGATACACCAACGAATAAAAACGTTGTTGACTTCGCTATCGTTGAATTAAAAGATTTACAAGGTAACTTGGTTGTCATGTATGACGATGCGGAAGGCTTAAACCCTGAAAAGCAAAAGATTTGTGACACTGACGGGCAGGTGACTTTCTTTGCTGAGATTGGTGATTATGACCTAGAAATAAACGGTAAAGCACAGCGTATTAACTTATCGTCTGGGCTTGCTAGCTTTATCAGCACTAAAACTGATGAAAGCGTGCAAGACTTTGTTGACTCATTCGCGCTCAAGATTTTCCAGTCACCTACCGATGGCGGATTAACTGAAATACAAACTCGTACAGTTGACGCGGGTGAAGTGTACGAAGTACGCAAAACTTCTGACGATTCATTAGCTACTATTTACAGTGATGCAGCCGGTACGACTGAGATTTTGCAAGATGGCACTGACAATAAATCGGGAAGTGATGGTGTTGTTGAGTTTTATATTTCCAACGGTGATTATTATATTGATTATAACTCAGTTAGCAGTGGTTTTTCTGCATCCCATAACAGTGTTTATGAAAGTACGCTAAGTCAAAAGGTAAGCTCATTAATAAGTAGAGGGGACGCTAGAATAGCTATTCTTGGTGACAGCACGGAAGCTGGGGTTGGTAACGGGTCTGGTAACGCTTATGGTGAATGCAGATCTAGTGCTAACGGTTCTCACTTTACAATGTCGCATTTTGACTTGATAAGTAAAGATAAAAACTTTATACCACTAGACCCTAGTAGCTACCAGTTAAGCCCGCCACTATCTGGGCCGCTACCTATCGGATTAGCAAGCTCATGGGTAATTATTGGGTCTGACAATCCAACAATTACACAGAGGGTAAGAGCTAAAAACGCAAATAACATAACAAGCTTTACGGTTTACATTCTTGAAAGAACGTCTGATGCAGCCCCAGCGTTTGATGTAACTATAAGAGCACCTGTAAGTAACGTAACAAAAACTGAGACCGTTGACACTTACACGCCGGCAGTGACGTTCGGTGACGCTGGGACTGTTAACGTGGCTGGGAGATTAGTTGCTAAAACCTTTTCGTGGACTGGTACAAACATCGACTATGACACGTTAGATATTAAAATAGACAACTTTAGAGGGGTTGGTGGTGCGGCTGGCACTGGTACGGCTCTTATATTTGGCTTTGCATTTAACGATGGGGTTAAGCTTAAGAATTTCGCGGTTAGCTCAACTACACTTGAAGATAACTCACCTGCAAATCAAGCTAGAGGTGTAACAACCACAGGGAGAATTGACGAGGCAGTTGCATGGGGTGCGAATTGCTTTTTCTTGGGCTGGGGAACTAATGACAGCAAGGATGGAGGACTAAGCTTAGGGAGTTTTTATGAAGAATACAGAGGTCAGATTGAATATATTAAAGCTCAAGTTCCTGACTCGACTATATGCCTATGTACAGACCCAAAAGGCTCAGGTGTCTACATTAACAATGTAAAATACAATGAGTTAGTAAGGCAATTGGCAAGAAGCGAGAGGTTATGTCTTTTTGATGTTGAAAACCTAGCGCAATCAATTGATGGGTTTTACGATGATGACGTACACCCATCAAGCAGTGGATACCTAGGCTTGTCTAAATCTATAAATAAACTATGCACACCAATTGATGAAAGTAATACTGTGTCGTACAAGTTGGCCTCTGGTTTTTACACTCAAAATATATTAGGCGGATTATCGGACTTAACAGGTTCATTTGTTGAAGTGGCCAGCATTGCGACAAGCAGACCCAGCGACAAGAATCTCCTAGATATAAATGTAAATATCTCGTATTACCTAGCATCTGGGGATTTAGAGCAAAGCGAAATAAAAATACTGATAAACGGATCGCAAATAAGATCTGTAAGATTTAACATTCTTCAAGGTGTTGCGTCGGCAACTTGGGACTGTAAAGAGGTAAGGGAGATATATCAAAGCGGAAATCTTGATACATACGTCATATCTGTAGAGCTTAAGAATTATTCAACTAGAGACTTGCCTAACTCAAGCTGGGTTAATGCTAGGTGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
612fe547965d2b15b3dfeb6562740b0739383bf80f6ba7661de5c323f3a290dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6534
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of a Novel Pseudoalteromonas Phage PHq0 Wang,D.B., Li,Y., Sun,M.Q., Huang,J.P., Shao,H.B., Xin,Q.L. and Wang,M. 2016 26468087 GenBank