Protein

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Genbank accession
XVB93923.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MADTDKNVIPSLYAAGQFTAITPFTTVVDESIFYKVEDVCTAAQFRNRNIDVWGLMFEPVGISEDAYESILDLVEENNGAIITLTSKNGSPVYIPSTYIKSFPLIDGVIFERFVVYTDLGACPPQMADKINTLIDHFQDYTKTNFGLTNAKSYIGSIPTRAYVSKEDAEIFESTRLNAIANAETDQIKLAKQAETITKQQLYIQELEAALIAAKNEQTP
Physico‐chemical
properties
protein length:219 AA
molecular weight: 24316,15870 Da
isoelectric point:4,45415
aromaticity:0,10046
hydropathy:-0,10822

Domains

Domains [InterPro]
IPR055618
STR
5–215
IPR055618
Coil
Unmapped
196–216
Coil
XVB93923.1
1 219
Architecture
STR
STR 5-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage VB_ZK_P1
[NCBI] 		3425683 Viruses > unclassified bacterial viruses >
Host Raoultella ornithinolytica
[NCBI] 		54291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB93923.1 [NCBI]
Genbank nucleotide accession
PV662128 [NCBI]
CDS location
range 210008 -> 210667
strand -
CDS
ATGGCAGACACTGATAAAAACGTCATTCCTTCACTCTATGCCGCGGGACAATTTACCGCGATCACACCTTTTACAACAGTGGTCGACGAGTCCATCTTTTATAAAGTAGAAGACGTCTGTACGGCGGCACAGTTTCGAAACAGGAATATCGATGTTTGGGGATTGATGTTCGAACCAGTAGGGATATCAGAAGATGCTTATGAAAGTATCTTAGATCTGGTAGAAGAGAATAACGGGGCGATCATCACCCTGACCTCTAAAAACGGATCTCCGGTTTATATCCCCAGTACGTATATTAAATCCTTTCCCCTAATCGACGGGGTGATCTTTGAAAGATTTGTTGTTTATACCGACCTGGGAGCGTGTCCTCCTCAGATGGCGGATAAAATTAACACGTTGATCGATCACTTCCAAGATTACACTAAAACTAATTTCGGACTTACTAACGCGAAGAGCTACATCGGCAGTATTCCTACCAGGGCCTATGTGTCGAAAGAAGACGCGGAAATATTTGAATCTACCCGGCTTAACGCTATTGCTAATGCAGAGACGGATCAAATTAAACTTGCTAAGCAAGCCGAAACCATAACCAAACAACAATTGTACATTCAGGAATTAGAGGCAGCGTTAATAGCCGCTAAGAATGAACAAACGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9582fd0bb2713048be50614a8582b86facfa943af086c1e39d4faf288e735862
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and identification of R. ornithinolytica phage and its targeted bacteriostatic effect on chilled pigeon meat Feng,S., Zhong,L., Zhou,J., Huang,Y., Sun,Y., Yuan,D. and Liang,W. 2025 — GenBank