Protein

View in Explore
Genbank accession
APD23086.1 [GenBank]
Protein name
PblB
RBP type
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MDALTRRQFDRAMFAKERTLAIRVGEYASRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHIEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKSLTVGMKTGRSLELDNVFMTQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFIFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGIEAKIQAQIEAADKDFDQKVDKIKKDFNDQVELAKARAEEVKRELSDTINQRFNSFDNGPLKETKHKAEEALRNAGASTLLAQEAKRIGLDSVARLEEFKSQTTSAQTALSGDLDALKRTIVNDIRPKQAQAEAEIAKQVEALSRTKNELSGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQVEAEIAKQVEALSRTKNELSGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQAGSSRNYFRNSRSRTFTTGGQAVYDYRTFIVPDFWKNSDRFKRDYVRISFDVTFPVALVNDMPAMVHFSAHPWYAYRNLIFKGGTVERQHFEFTIDLSSSSEDYQTNNVFIRFGTNYGFPAGLQVVIENAMLSVGNYFPAYQPAYEDQEDRVSVVESNFKQRADSLDAGVSRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELASRIASVQASGRNLFLNSLFKQDIPKTGIWTTSTYTATIDSESKYLGHKALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKQTTNEWLFNFNQEGTIWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRANSLEAGVNRLTEGLRTKADISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSVWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDADGLITEAKATFERTAQGLRTDLSAIQEYVNKDGQRQEALQRYTREESARQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGADNQISNLKTQVATNKDNAERQMGRISDQVSANKASADSQFANVTNQLARKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNATNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDVVADANKKLEATQTKMTLLTGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILDAEAVTADKVRFDAAFIRKMTANDAFIDQLTSKRIFSTKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGHGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQVGSGSLKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA
Physico‐chemical
properties
protein length:2127 AA
molecular weight: 238065,94200 Da
isoelectric point:8,60319
aromaticity:0,09027
hydropathy:-0,54509

Domains

Domains [InterPro]
DC_1421
STR
2–504
DC_1421 Coil DC_0720 Coil DC_0720
Coil
Unmapped
372–399
Coil Coil Coil DC_0720 G3DSA:2.60.120.260 IPR030392
DC_0909
STR
486–741
DC_0909 IPR030392
DC_0976
RBD
2083–2127
DC_0976
APD23086.1
1 2127
Architecture
STR
STR
RBD
STR 2-1333 | STR 1428-2094 | RBD 2095-2127
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP36
[NCBI] 		1916175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD23086.1 [NCBI]
Genbank nucleotide accession
KY065476 [NCBI]
CDS location
range 32027 -> 38410
strand +
CDS
ATGGACGCTTTAACTAGACGACAATTTGACAGAGCCATGTTTGCCAAGGAAAGGACGCTGGCTATTCGTGTTGGTGAATATGCTTCACGGGATATCAAAGAGGCTAGTTTTGAGTATGGCTACATCAAGGGCGATACTTATAAGCCTGGTGGAACCTGCGCTGGTAGCGGTAAAATTACCTTTACCAGTATCATTACCACGTTCAATAAGCTGGATACCCTGCACCCTGAGATTGGTCTACTGGTTGGGGATACCTACCAGTGGGTCAAGATGGGGGAATACTTCATCAACGATATTGAGATTGACCGAAACCGCAACACAACCACACTTGAACTTATGGACGGTATGTTTAAGCTCAATCGTGAGTACGTGACGGACTTGCATTTCCCAGCTGAAGTACGAGAGGTTATTCAGGAAATCTGCCTGAAAACAGGCATTGAGTTAGCGAATGACTATTTCGGAATCAGCGCTATGCGTTACCATATCGAGCAAGTTCCTGAAGGTAAGAAACTTTCGTTCAGGGATATGCTGAGCGCTATGACTCAGATGATTGGGATGTCTTGTTTCTTCAACAGAGAAGGCAAGATGGAAATCCGTGATTTGACTGAGTCCAATATCACGATCAACGCTGACAGTTACTTCTTGCATGGCTTGACCAAGAGTGAGATTGAGTATCAGATAGCTGGTATCACTTGTAAGACGGACAAGAAGTCTCTGACAGTCGGTATGAAGACAGGTCGGTCTTTGGAACTGGACAATGTCTTTATGACTCAGAGCGCTTTAAATGACTTGTATTACAAACTGAAAAACCTAACTTACTATCCGTATAATCTCAACTACCAAGGACATTTGTTACTTGAGGTTGGGCAGTGGGTAACCATTCAGACCAACAAGAAAGAGACTTTTAAAGTTCCTGTCTTAAGTCAGAGCTTTATCTTTAAAGGTGGTCTGAGAGGTCGTATCAGTGCAGATAGTAAGGCTGGAAACGATACCCAGTATTCGTACGAGGGAACGATTACCAAGCAGATAAAGCAACAAGATGGCATTGAAGCAAAAATCCAAGCGCAGATTGAAGCAGCAGATAAAGATTTTGACCAAAAGGTCGACAAAATCAAAAAAGACTTTAACGATCAAGTAGAATTGGCCAAAGCCAGAGCTGAAGAAGTCAAGAGAGAACTGTCTGACACTATCAATCAGCGATTTAATAGCTTTGACAACGGGCCATTGAAAGAAACTAAGCACAAGGCTGAGGAAGCTTTGCGAAATGCTGGCGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGGGCTGGATTCTGTTGCTAGACTTGAAGAGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCAGGTGACTTGGACGCTCTGAAACGGACTATCGTGAATGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAGAATGAACTGTCTGGCGCAAGTACCCTACTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCTCAGACGGCTTTGTCAGGTGACTTGGATGTTCTAAAACGAACTATCGCAAACGATATTCGACCGAAGCAAGCACAGGTTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAGAATGAACTGTCTGGCGTGAAGTCAGCGCAAGCGACGTATGAGGAGACGACGACTCGTAGACTGTCAGAACTGACCAACTTGGCCAATGGTAAAGCCAGCAAGTCAGAACTCACGCAAACAGCTGAGGAGCTGGCTAGTCGGATTGCGAGTGTGCAGGCAGGTAGTTCACGGAATTACTTCAGGAATTCACGTTCAAGAACGTTCACAACAGGAGGTCAAGCGGTATACGACTATCGAACATTCATAGTTCCTGATTTCTGGAAGAACAGTGACAGGTTCAAGCGTGATTATGTTCGCATATCTTTTGATGTGACTTTCCCTGTCGCCCTAGTAAATGACATGCCTGCTATGGTGCATTTTAGTGCTCATCCATGGTATGCCTACAGAAACTTAATTTTTAAAGGTGGAACTGTCGAACGCCAACATTTTGAGTTTACGATTGACTTGTCTAGTTCTTCTGAGGACTATCAGACTAATAATGTGTTCATTCGTTTTGGTACTAATTATGGATTTCCTGCTGGTCTGCAGGTCGTCATTGAGAACGCTATGTTATCGGTTGGTAATTATTTTCCAGCCTATCAACCAGCGTATGAAGACCAAGAAGACCGTGTCTCAGTAGTCGAATCCAACTTTAAGCAGCGTGCTGATTCACTCGACGCTGGTGTAAGCCGTCTGACTGAAGGGCTTAGAACTAAAGCGGATATCAGCTCACTCAATGTGACTGCTGAAAATATCCGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAATGCAACCAAAGATAAAGCCAGCAAGTCAGAACTCACGCAGACAGCTGAGGAGCTGGCTAGTCGGATTGCGAGTGTGCAGGCATCCGGTCGAAATCTATTCTTGAACTCACTATTCAAGCAGGATATTCCAAAAACAGGAATTTGGACAACGAGTACATATACGGCTACTATCGATAGCGAAAGTAAGTATCTTGGACACAAGGCTCTTAAAATTATAGGTTTGAATCCATCTGGCCGTGATGGAGGTAATCCCAAGGTTACTTATCCAGCTCTGGGTCAATTCGGGAAAGTAATTCCCGGAAGTACGACTAATCAAGATGTAACCATTAGTTTTTATGCTAAGGCAAATAAAAATGGAATAATGCTAAGATCTCGATTAGGGAATATCGGATATAAAACTGGAAATGTGACATTGTCGACAGAAATTAAGCGATATGTTGTCCATATTCCAAAAGGTTGGACAAACGAATCCAAGCAGACCACAAATGAATGGTTGTTCAATTTCAACCAGGAAGGAACCATTTGGATTTGGATGCCGAAGTTTGAAATAAGCGATGTAGATACTTCTTATTCAGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTTGAATCGACCTTCAAACAACGAGCCAACTCGCTCGAAGCTGGTGTGAATCGTCTGACTGAAGGCCTTAGAACCAAAGCGGATATCAGCGCACTCAACGTGACTGCTGAAAATATTCGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATCCGTCAGGAAATCCTGAATGCAACCAAGGATAAAGCAGATAAGACTCTTGTCGTGGCTGAAGCTGGGAAATTGCGTGAAGAATTTTCAAAAATGAAGGTGGGAGGCCGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCTACTTTAACGTTCAACCTTGAACCAGATTTCAGCTCAAGGTTGTACCAAAAAGTTACTTTTAGCGTTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGCTGATGGTCTCATCACTGAGGCTAAGGCTACCTTTGAGCGGACAGCTCAGGGCTTGCGAACCGACTTATCAGCTATTCAGGAATATGTAAATAAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCGCGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAAAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGTCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGCCTTTCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGTAATAAACAAGGCGCAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAGTGCTGATAGTCAATTTGCGAATGTGACCAATCAACTAGCGCGAAAAGTAGAGACTACTGACTTTCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTTGGGAAATATAGTGTAAGCGGCCCTAACCTCATTAAGAATAGTGATTTTAAAAATGCTACGAATGAATGGGGCTCAACTCAAAATTTAGGAAGATTGGTTAAGCATAGCTTTTATCACAACGGGCAGAAAGACCTTATGCGTTTAAGTAATGCAACTAAAAACGAAAACTTTTTGTATAGTCACCGTTTTAATCTTGAACGAAATACTGACTATGTACTGAATTTTAGAGGATTTAACAACAGTGCTCTAGCAAGCTATGATGTTTATATTTTGGGACGAAGAGCAGGCGAGAGCGATGGATTCACAATCGTTAAGAAAGTTGTTAGCAGCAAGAAACTATCTACCTCTAGATGCGAAGATGTCTCAGTAACTTTTAATTCCGGAGAAATGGATAATGCTTACATTCGTTTTGATAACAATGGCTCATCATCAGGAACAGCTGATTTGTATATTACAGAAGTTGACTTGTACAAAGGTTATAAACCTAGAACATGGCAACCACATCCAGAAGATGTGGTCGCAGATGCGAATAAGAAGCTTGAAGCCACGCAAACAAAAATGACTCTACTAACTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGACGCTGAAGCGGTCACGGCTGATAAAGTGAGATTTGATGCTGCGTTTATTAGGAAAATGACTGCAAATGACGCTTTTATTGACCAACTGACATCTAAACGTATCTTCTCTACTAAGGTTGAGTCCGTCATTTCTAGTTCAACCTTCCTAGAAGCCTATCAAGGTCGAATTGGTGGATTCACACTTGGTCAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGCATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTCTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGTTGGAATCCCAAAGGCGGAAGGAATGCGGTTGTTTGGTGGAATCAGGTCGGTAGCGGTAGCTTGAAGTATTGGATGGAACAAAAATCAGATAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGATAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTACATATAGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcf1a80ed9ba68c797e4d68fcdea7aa5db0b7bb8385467c378fe2100bca147ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6227
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50