Protein

View in Explore

Genbank accession

XPP58742.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence RBPdetect2

Probability 0,96

Protein sequence

MYSIKSDLGVLGNSTLEKALLVKGDAIFKQNVTVEGTVTFADATFTQLTVTGTAAFADITASGDTTLTNLATTGNTVLGDASTDTVVVNGTASFAAPVSLAGDVTQAAGTASFNDVAAKTLTVDGLSKLDGNLEMKPTSTATLGDTDVQDLTVNGVTVIKGTSTFEEKATFGDVEINGTLSGTLTMEDGSFTNLTVSNDSTLNKLSVTGNAVFGNNISGLTSTATLANVTMNGQAAIITFNYNDVANPSYIKSSIQPYKVSTQEIQSNIADITRIEVGSEADATSTNGLHSLGKATMDYVAIKGNTTIGTSQPQLTVAGASVFSGTTTVGDLVITGSVTGLTFDDITTNNLTVSGASSLQNVTMSGNLTALNSTATIQNITMNGQSALLTFNYTDSSNPSYIKSSIQPYKVSSHEFQGDVASIRELSTGVLNDTIIGHKGLGVNELDYVHVKGNSTIGTSRKQLIVDGDSQFAGTTTVNNIVVTGTTTGITADVAGADITPNSVTATAGVEAATLESTTTTTVGTDLTVLNGTATIKDLVVTGTTTGVTVEANVDGLDIKPASVETTSDIIAGADLTVAGTLSGASSTALKTNSISVTGTVNVSQNVNAAGASFTQAGTGLDVTNNAHVGGTLTVDGDTAFGGETGTTTIHDLVVTGTTTGVTVVADVDGLDIKPASVESTGIVTGTNLTASGTVSGATVQAGALTVTNDSTVGGDLTVTGTLSAGAIDLSGTDISANKLTTTTTVDVGTDLTVGGTATVTGAAQFNNTLTVTGLSTLGAVTASDVQASGTAQANSLNVTTDGVIGGDLSVTGTLTAGTIDLGAADISANSLTTVAGVTVGSDLSVAGNVTGTLKTTNVTTSGTLGVTGASTLGSVTATTVGASDLNLSGTLSVTGAATFDGDITSSTETVAIAKNTAITGDLAVSGTLTAGSIDLSGTAINAASLDTTGNAHVGGDLTVDGTFDLSGTDLAAASLASAGNTTVGSALVLTTGTVTGSPSISGTLTVAGASTVADLAVGGTITKAGGGNLAITPSTDFAGDVAVAGDVTVTGTLTPSGGLDLSSADITANSLSVAQGVETTQNATIGTSLTVGTTLGVTGASTLSGGVTTTTVSASGLVSAGTLTSTGIATLSGGVTTTTVSASGRVTSIEAQVGAGSFDTNYKLNVNGNSIFNGDVFIAGRLNGTIDLSGVDLNPRNVTASGNGSFAGTLSSGDTFTAPTGIFGVEGSVNNSLQVNGNVVATGDFEVGGVIKGTLDQSAAAVTVGSLETALAGGITIGGNGPLVLGSGGIITGAPVISGNTTVGGTFTSTGLATLNGGLTVTGTTTLGSTTLGATTAASLSVTGISTLSGNTTVGGTLDVTGKTTVADLEITGTLTTNVADLVTDSVSTKRYTVKPMNVETTVTSGSWTPDGTSNVYNVTVTGATQIGNMPNPSGEAGSWFIYLTNTDGGAISMGSAYAQPLGEWGTTPGGVTICQIVYCGVGSIYDVFLSQRA

Physico‐chemical properties

protein length:	1495 AA
molecular weight:	146371,22660 Da
isoelectric point:	4,05003
aromaticity:	0,03411
hydropathy:	0,23652

Domains

Domains [InterPro]

DC_0092
STR
1–158

DC_0092 DC_0092 DC_0092 DC_0931

DC_0092
STR
130–326

DC_0092 DC_0092 DC_0092 IPR058970

XPP58742.1

1 1495

Architecture

STR

RBD

STR 1-785 | STR 849-1163 | RBD 1184-1495

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0092	STR	DC_0092	1	158	Novel HMM	DC_0092	Central	Low	Positional only	72 proteins / 72 hits
DC_0092	STR	DC_0092	130	326	Novel HMM	DC_0092	Central	Low	Positional only	72 proteins / 72 hits
DC_0092	STR	DC_0092	310	621	Novel HMM	DC_0092	Central	Low	Positional only	72 proteins / 72 hits
DC_0092	STR	DC_0092	602	785	Novel HMM	DC_0092	Central	Low	Positional only	72 proteins / 72 hits
DC_0092	STR	DC_0092	849	1037	Novel HMM	DC_0092	Central	Low	Positional only	72 proteins / 72 hits
DC_0092	STR	DC_0092	994	1163	Novel HMM	DC_0092	Central	Low	Positional only	72 proteins / 72 hits
DC_0931	RBD	DC_0931	1184	1495	Novel HMM	DC_0931	C-terminal	Low	Positional only	65 proteins / 65 hits
IPR058970	RBD	DC_0552	1409	1484	InterPro cluster	Putative phage tail fibre, C-terminal domain	C-terminal	Low	Positional only	292 proteins / 292 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage Hallingskeid [NCBI]	3374949	Viruses >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

XPP58742.1 [NCBI]

Genbank nucleotide accession

PQ464590.1 [NCBI]

CDS location

range 232468 -> 236955
strand +

CDS

ATGTATTCTATAAAATCTGATCTAGGTGTATTAGGTAATAGTACATTAGAAAAAGCACTACTCGTTAAAGGCGATGCCATTTTTAAACAAAATGTCACCGTTGAAGGGACTGTGACTTTTGCTGATGCAACTTTCACCCAACTCACTGTCACTGGCACGGCTGCTTTCGCAGATATTACCGCATCTGGTGACACAACATTAACAAACCTCGCGACAACTGGAAACACTGTTCTCGGTGATGCAAGTACTGACACCGTTGTAGTTAACGGTACTGCTTCTTTTGCCGCACCAGTTTCACTAGCTGGCGATGTAACCCAAGCGGCTGGTACAGCATCATTCAATGATGTAGCTGCTAAAACTCTAACCGTTGATGGTCTTTCTAAGCTTGACGGAAATCTTGAAATGAAACCAACCAGTACTGCTACTCTAGGCGATACTGATGTTCAAGACCTAACCGTTAATGGCGTAACCGTAATTAAAGGTACTAGTACTTTTGAAGAGAAAGCAACCTTTGGTGATGTAGAGATTAACGGTACTCTATCTGGTACTCTAACAATGGAAGATGGCAGTTTCACTAACTTAACTGTTTCCAACGATAGTACTCTAAACAAACTAAGCGTAACTGGTAACGCAGTTTTCGGTAACAACATTTCTGGTCTAACCAGTACTGCTACCCTAGCTAACGTAACCATGAACGGTCAAGCTGCTATTATCACGTTCAACTACAACGATGTAGCTAATCCATCCTACATTAAATCAAGTATTCAGCCATACAAAGTTAGTACTCAAGAAATTCAATCTAATATCGCTGATATCACTCGTATTGAAGTAGGTTCTGAAGCTGATGCTACCAGTACTAATGGTCTACATTCCCTTGGTAAAGCAACTATGGATTACGTTGCAATCAAAGGTAACACCACCATCGGTACTTCACAACCACAACTAACTGTTGCTGGTGCATCTGTATTCTCTGGTACAACAACTGTTGGTGATCTAGTAATCACTGGTTCAGTAACTGGTCTAACCTTTGATGATATCACTACAAATAACTTGACTGTATCTGGTGCAAGTTCTCTACAGAACGTAACCATGAGTGGGAACCTAACTGCTCTAAACAGTACTGCAACTATTCAAAACATCACAATGAATGGTCAGTCTGCACTACTAACATTTAACTACACTGATAGTTCTAACCCTTCGTACATCAAATCTAGTATTCAACCTTACAAAGTAAGTTCTCATGAATTCCAAGGCGATGTGGCTAGTATTCGTGAACTAAGCACTGGTGTTCTAAATGATACTATCATTGGTCACAAAGGTCTAGGTGTGAACGAGCTAGATTACGTACACGTTAAAGGTAACAGCACAATCGGAACTTCTCGTAAACAGCTAATTGTTGACGGTGACAGCCAATTTGCAGGTACTACAACTGTTAACAACATCGTAGTAACTGGTACTACTACTGGTATCACTGCGGACGTTGCTGGTGCAGACATTACCCCTAACAGCGTAACTGCAACTGCTGGCGTTGAAGCTGCAACTCTAGAAAGTACAACTACTACCACTGTTGGTACTGACCTAACTGTACTAAACGGAACTGCGACTATTAAAGATCTAGTTGTTACTGGTACTACTACTGGTGTTACCGTTGAAGCAAACGTAGATGGACTAGATATCAAACCTGCTTCGGTTGAAACAACTTCTGATATTATTGCAGGTGCTGATTTAACTGTTGCTGGTACATTGTCTGGGGCTTCATCTACTGCATTGAAAACCAATTCAATTTCCGTAACTGGTACTGTAAATGTTAGTCAAAATGTGAATGCAGCAGGGGCTTCCTTTACACAAGCAGGAACTGGTCTAGATGTTACCAACAATGCTCATGTCGGTGGAACACTAACTGTTGATGGAGACACTGCATTCGGTGGCGAAACTGGTACTACCACAATTCACGACCTAGTTGTTACTGGTACTACTACTGGTGTTACTGTTGTTGCCGATGTTGATGGTCTAGATATCAAACCTGCTTCAGTAGAATCTACTGGTATTGTTACTGGTACAAACCTAACTGCATCTGGTACTGTTTCTGGTGCAACCGTTCAAGCTGGTGCATTAACTGTAACGAATGACAGTACTGTAGGTGGTGATTTAACCGTAACTGGTACGCTATCTGCTGGTGCTATTGATTTAAGCGGAACTGACATTAGTGCAAATAAACTAACAACTACAACTACAGTAGACGTAGGAACTGACCTAACTGTTGGTGGCACTGCAACTGTAACTGGTGCAGCACAGTTTAATAATACACTAACCGTAACTGGTCTTTCTACATTAGGTGCAGTAACTGCATCCGACGTTCAAGCTTCTGGCACGGCACAAGCAAATTCACTAAATGTTACAACTGATGGTGTAATCGGTGGTGATTTGTCAGTAACTGGTACACTAACTGCTGGTACTATTGATTTAGGTGCTGCTGATATCTCTGCAAATAGTCTTACGACTGTTGCTGGTGTTACAGTTGGCTCTGATTTGTCAGTAGCTGGTAACGTAACTGGTACACTAAAAACTACCAACGTAACTACGAGTGGTACTCTAGGAGTAACTGGTGCTTCCACCCTAGGTTCAGTAACTGCAACAACTGTTGGTGCTTCAGATCTAAATCTATCAGGTACACTATCTGTTACTGGTGCAGCAACATTCGATGGTGATATCACCTCTTCAACTGAAACTGTTGCAATTGCAAAAAATACTGCAATTACTGGTGATTTGGCGGTTTCTGGCACACTAACTGCTGGATCAATTGACCTAAGTGGTACTGCAATTAATGCTGCATCACTTGATACTACTGGAAATGCTCATGTTGGTGGTGATTTAACAGTAGATGGCACTTTCGACCTATCTGGTACTGACCTAGCAGCAGCTTCACTTGCAAGTGCTGGTAACACTACTGTAGGTTCTGCATTGGTACTAACTACTGGTACTGTAACTGGTTCACCTTCTATTTCTGGTACACTAACTGTTGCTGGTGCATCAACTGTTGCAGATTTAGCTGTTGGTGGTACAATTACTAAAGCTGGTGGCGGTAATCTTGCAATTACTCCTAGCACCGATTTCGCTGGTGATGTAGCCGTAGCTGGTGATGTAACCGTAACTGGTACTCTAACACCATCTGGTGGTTTAGACCTAAGTTCTGCTGATATCACAGCTAATAGCTTGAGTGTTGCTCAAGGTGTGGAAACTACTCAAAATGCAACCATCGGAACTTCATTAACTGTTGGAACCACGCTAGGCGTAACTGGTGCAAGTACATTGTCTGGTGGTGTAACTACTACTACTGTATCTGCTTCTGGTCTAGTATCTGCTGGAACTCTAACCAGTACTGGAATCGCAACCCTAAGTGGTGGTGTAACTACTACTACTGTATCTGCTTCTGGTCGTGTAACTTCTATCGAAGCACAAGTTGGTGCTGGTTCATTCGACACTAACTACAAATTGAACGTGAATGGTAACAGTATCTTCAACGGTGATGTATTCATTGCTGGTAGATTGAACGGTACTATCGACCTAAGTGGCGTTGACTTGAACCCACGTAACGTAACTGCGTCTGGTAACGGTTCATTTGCTGGTACATTGTCTTCTGGTGATACGTTTACTGCTCCTACTGGTATCTTTGGTGTTGAAGGAAGCGTAAACAACAGTCTACAAGTTAACGGTAACGTTGTTGCAACAGGTGACTTCGAAGTTGGTGGTGTAATTAAAGGTACTCTTGACCAATCTGCTGCTGCTGTTACAGTAGGTTCTCTCGAAACTGCTCTAGCTGGTGGTATTACTATTGGTGGAAACGGTCCTCTAGTTCTTGGTTCAGGAGGTATCATTACTGGTGCTCCAGTAATAAGTGGCAACACTACTGTTGGTGGTACATTCACCAGTACTGGTCTAGCTACTCTAAACGGTGGACTAACCGTAACCGGAACAACAACTCTAGGTTCTACAACTTTAGGTGCTACAACTGCTGCAAGCCTATCTGTTACTGGTATTAGTACTTTAAGTGGCAACACTACTGTTGGTGGTACTCTAGATGTAACTGGTAAAACCACTGTTGCTGATCTAGAAATCACTGGTACTCTAACTACTAATGTCGCTGATTTGGTAACTGACTCTGTTAGTACTAAGCGTTATACTGTTAAACCAATGAACGTAGAAACTACAGTAACTTCAGGTTCTTGGACTCCAGATGGTACAAGTAACGTTTACAACGTAACAGTAACCGGAGCGACTCAGATTGGTAACATGCCTAACCCAAGTGGTGAAGCTGGTTCTTGGTTCATTTACTTGACCAATACCGATGGCGGTGCAATCAGTATGGGTTCTGCTTATGCACAACCTTTAGGAGAATGGGGTACTACTCCAGGTGGCGTAACTATCTGTCAAATCGTGTACTGCGGTGTTGGCTCAATTTACGATGTATTCCTATCACAACGTGCTTAA

Genome Context

Tertiary structure

PDB ID

c2d8311ee4c45473ce1a4233deda500938ab3aa89ae457090b45e3e6cc690dff

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,4996

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence