Protein

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Genbank accession
AGG54529.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MALTQVSSGGVKDNSIINADVKSDAAIAGSKLADDSIAEAKLDIHAAPSGTDKVLGYTSNGMEWIVSSAGATGGGTDKIFWENGQTITTNYTVGDGFGAAANAMSAGPITINNGVTVTVNSGETWTIL
Physico‐chemical
properties
protein length:128 AA
molecular weight: 12868,03410 Da
isoelectric point:4,26079
aromaticity:0,05469
hydropathy:0,02266

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage SS120-1
[NCBI] 		616674 Uroviricota > Caudoviricetes > Autographivirales > Banchanvirus SS1201 >
Host Prochlorococcus marinus subsp. marinus str. CCMP1375
[NCBI] 		167539 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG54529.1 [NCBI]
Genbank nucleotide accession
HQ316584.1 [NCBI]
CDS location
range 15997 -> 16383
strand -
CDS
ATGGCTTTAACACAAGTAAGTAGTGGTGGAGTTAAAGACAACTCCATCATAAATGCTGATGTCAAATCAGACGCAGCAATAGCAGGCAGTAAGCTTGCAGACGATTCAATAGCAGAAGCAAAACTAGATATCCATGCTGCCCCTTCTGGTACAGATAAAGTCCTCGGTTATACCTCTAATGGTATGGAGTGGATTGTCTCATCAGCGGGAGCTACAGGTGGAGGTACAGATAAAATCTTCTGGGAGAATGGTCAAACAATAACGACTAACTACACAGTAGGCGATGGCTTCGGAGCTGCAGCAAACGCTATGTCTGCAGGCCCTATCACAATCAACAATGGGGTAACTGTGACTGTAAATAGCGGGGAAACCTGGACAATTTTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
25cd3ab45778b61e44b9a6a227e15ab5a6507d112e5b77620c71d6784f5b6594
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7126
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-SSP9 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank