Protein

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Genbank accession
QIN99265.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSFFAGKLNNKSILSLRRGSGGDVNIHINPDSQTIFHSDMPHVIITETHSTGLRLDQGAGDYYWSDMPSRITQLHNNDPNRVVLTEIEFSDGSRHMLSGMSMGVGAKAYGIINPQVMSQGGLKTQITASADLSLDVGYFNSGTSGTIPQKLRDGTGCQHMFGAFSGRRGFASSAMYLGGAALYKSAWDGSGYVVADSGTLTIPSDYVRHPGARNFGFNAIYVRGRSCNRVLYGMEGPNYTTAGAVHGASSSGALNFIYNPSNPSAPKYSVGFARADPTNYAYWESMGDPNDSANGPIGIYSEHLGIYPSKITWYVTNLVYNGSGYSIDGGLFNGNDIKLSPMEFIIKGVNVNNTSWKFINFIEKNFNVGNRADFRDVGCNLSKGSPSTGISGIATFGLPTTESNNAPSIKGGNVGGLHTNVVSIYNFLPSASWYVSSNPPKIGNSYGDVWSENLLPLRLLGGSGSTILSGNVVFQGNGSVHVGTVGLDLNSSRNGAIVCTMEFIDDTWLSAGGIGCFNPTEMLSKGAEYGDSRFRIGGNATNKKLHQILSLPAGEYVPFFTIKGTVVNACKLQAAAYNPTPYWVSGLPGSVGQTGYYTLTYYMRNDGNNNISIWLDSSMSNIIGMKACLPNIKLIIQRLT
Physico‐chemical
properties
protein length:640 AA
molecular weight: 68548,12880 Da
isoelectric point:8,28059
aromaticity:0,10469
hydropathy:-0,17813

Domains

Domains [InterPro]
IPR059609
RBD
1–640
IPR059609
QIN99265.1
1 640
Architecture
RBD
RBD 1-640
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN99265.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,5759
Central domain 19 217 200 0,2192
C-terminal 218 640 422 0,9337
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-217
C-terminal
218-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage oldekolle
[NCBI] 		2713308 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus oldekolle
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN99265.1 [NCBI]
Genbank nucleotide accession
MT074448 [NCBI]
CDS location
range 11289 -> 13211
strand +
CDS
ATGAGTTTTTTCGCTGGCAAGTTAAATAACAAATCTATACTCTCTTTACGTAGGGGTAGTGGTGGTGATGTTAACATACATATTAATCCTGACTCTCAAACAATATTTCATTCAGATATGCCCCATGTAATTATAACTGAAACTCATTCCACGGGGTTAAGACTAGATCAAGGGGCTGGAGACTACTATTGGTCTGATATGCCTAGCAGAATCACCCAGTTACATAATAATGACCCTAATAGGGTTGTGCTAACGGAGATTGAGTTCTCCGATGGTTCTAGACATATGCTATCTGGCATGTCAATGGGGGTAGGGGCTAAAGCGTATGGAATTATAAATCCGCAGGTCATGTCTCAGGGTGGTTTAAAAACACAAATAACAGCTAGTGCTGATCTATCTCTTGATGTAGGCTATTTTAATAGTGGTACTAGCGGTACGATCCCCCAGAAATTAAGAGACGGTACTGGGTGCCAGCATATGTTTGGCGCCTTTAGTGGACGTAGAGGGTTTGCATCTAGTGCAATGTATTTAGGGGGTGCCGCTCTTTACAAATCTGCCTGGGATGGTTCAGGATATGTAGTGGCGGATTCCGGAACTCTAACTATTCCTAGTGATTATGTTAGACACCCAGGAGCTAGAAACTTTGGATTTAACGCCATATATGTTCGTGGTAGATCTTGCAATAGAGTTCTTTATGGTATGGAAGGGCCCAACTACACCACTGCTGGAGCTGTACATGGGGCGTCGAGTTCAGGGGCTCTTAACTTTATATATAACCCTAGCAATCCCTCGGCTCCTAAGTACTCTGTAGGTTTCGCACGTGCTGATCCTACTAACTATGCTTATTGGGAAAGTATGGGTGATCCTAATGATTCTGCCAATGGGCCTATAGGTATCTACAGTGAACATTTAGGCATTTATCCATCTAAAATTACATGGTATGTTACTAACCTAGTATACAATGGTTCTGGGTATAGTATAGACGGTGGGTTATTTAACGGTAATGATATTAAGCTTAGTCCAATGGAATTTATTATTAAAGGGGTTAATGTTAATAATACATCTTGGAAATTTATTAATTTTATAGAGAAAAATTTCAACGTTGGCAACAGGGCTGATTTTCGTGATGTTGGTTGTAATCTAAGTAAAGGTTCTCCCTCAACAGGAATATCAGGTATAGCAACATTTGGACTACCAACCACAGAGAGCAATAATGCTCCTAGTATTAAAGGTGGTAATGTTGGTGGCTTACATACTAATGTTGTTAGTATTTATAATTTTTTACCTTCAGCATCTTGGTACGTATCTAGTAACCCACCAAAAATAGGTAATAGCTATGGTGACGTTTGGAGTGAGAATTTATTACCATTAAGACTTCTGGGAGGTAGTGGTAGCACAATACTATCTGGAAACGTAGTATTCCAGGGCAATGGATCTGTACATGTTGGTACTGTGGGGTTAGATCTTAATAGTAGTAGAAATGGTGCTATTGTATGTACTATGGAGTTTATAGATGATACATGGCTATCAGCAGGTGGTATTGGTTGCTTCAATCCTACGGAAATGTTATCCAAAGGGGCAGAATACGGTGATAGTAGATTTAGGATAGGGGGGAATGCCACAAATAAAAAACTACATCAAATACTATCCTTACCCGCCGGAGAATACGTTCCATTCTTTACCATAAAAGGTACGGTTGTAAATGCTTGTAAATTGCAGGCTGCTGCGTATAACCCAACTCCGTATTGGGTATCTGGGTTGCCTGGATCTGTTGGACAAACAGGATATTATACTCTAACTTACTATATGAGAAATGATGGAAATAATAATATCTCTATTTGGTTAGACTCCTCCATGAGTAATATAATTGGCATGAAAGCATGCTTACCTAATATTAAACTTATAATTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
47fb419360b37c18ce787ca82e4e08fd9eee59c6ebf4a8ffa93f191a40947f2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2581
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50