Protein

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Genbank accession
AUR96939.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTTKVNNRMIDGATVNVLDFGADPSGQTDSTSQIQEAINTAKTQGVIVDFPGGSYLISAPLTIQAGQHLRGVNGRLTGSFKDVEIITTTAGLDSLLNISLGHYCKIEGINFSCNGFANTGIRGVNVFGAVLENLRVDTALFEGVVFQNDGTDIGCFGNRLVKVAVGDCDTGIFLGSTGGNLNLTVLEQCVITNCDYGVREFGDQRGRDNSYLNIDIENCRIGMYLQGTSFRVTGGYFEFNDTNIQVNNSPNNLQQQTGYIGQNSFLGSYNFPGTPAKDTIGITASDAYNLTIDTNWFAYCKQGIYLDAGCQWNELRNNFMGAVGSSNVETRYSDFGEYNTISQGNQRTKQVQQHAGAGPFFTSSSYNLVACDIGNNATTLQVSDVTDWLEGYETEIYTLMSSSNTGSVTITTAGSALFYGQVSGNRVYGASTITIGYGDRVTLTATSSGDFLVRSSNSIQ
Physico‐chemical
properties
protein length:460 AA
molecular weight: 49391,95390 Da
isoelectric point:4,50673
aromaticity:0,09783
hydropathy:-0,17761

Domains

Domains [InterPro]
IPR012334
STR
13–358
IPR012334
IPR011050
STR
13–325
IPR011050
IPR024535
ENZ
15–223
IPR024535
AUR96939.1
1 460
Architecture
STR
STR 13-358 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR96939.1
1 460
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,9488
Central domain 31 346 317 0,9761
C-terminal 347 460 113 0,9824
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-30
Central
31-346
C-terminal
347-460

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.235.O._10N.261.52.B2
[NCBI] 		1881352 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96939.1 [NCBI]
Genbank nucleotide accession
MG592599.1 [NCBI]
CDS location
range 5290 -> 6672
strand +
CDS
ATGACAACTAAAGTTAATAATCGAATGATTGATGGGGCTACTGTTAACGTTCTAGATTTTGGTGCAGACCCTTCTGGACAAACAGATAGCACGTCTCAGATCCAAGAGGCAATCAACACTGCTAAGACACAAGGGGTTATTGTTGATTTCCCCGGAGGCTCTTACTTGATCAGCGCCCCCCTTACAATTCAGGCAGGGCAACATTTACGTGGAGTGAACGGTCGTTTAACTGGATCCTTTAAGGATGTGGAAATAATCACAACCACTGCTGGTCTCGACTCATTATTAAATATAAGCCTTGGGCACTATTGTAAGATTGAAGGAATTAACTTCTCTTGTAATGGATTCGCAAACACAGGAATACGCGGGGTAAATGTATTTGGCGCTGTGTTAGAGAACTTACGTGTTGACACCGCGTTGTTTGAAGGTGTTGTTTTTCAAAACGACGGTACAGATATCGGGTGTTTCGGGAACAGGTTGGTTAAAGTTGCAGTGGGGGATTGTGACACAGGGATTTTCCTAGGGTCTACTGGAGGTAATCTGAATCTAACAGTCCTTGAACAGTGTGTTATCACTAATTGCGATTACGGTGTCAGAGAGTTTGGGGATCAGAGAGGGCGTGATAACAGCTATCTTAATATAGATATCGAAAACTGCCGCATAGGTATGTACTTACAAGGGACGAGTTTTCGTGTTACAGGCGGTTACTTTGAATTTAATGACACGAATATACAGGTTAACAACAGCCCAAATAACTTGCAACAGCAGACAGGTTATATAGGTCAGAATAGTTTTTTAGGATCTTATAACTTTCCGGGGACACCTGCTAAAGACACTATAGGTATTACTGCAAGTGATGCGTACAACCTGACAATAGATACAAACTGGTTCGCATACTGCAAGCAAGGTATCTACTTGGACGCTGGATGCCAGTGGAATGAGTTGCGTAACAACTTCATGGGTGCCGTAGGTTCGTCCAATGTGGAAACACGTTACTCTGATTTTGGGGAGTACAACACTATTTCTCAAGGTAATCAAAGAACTAAGCAGGTGCAACAACATGCTGGTGCGGGGCCTTTCTTCACCTCATCTAGTTATAATCTTGTAGCATGTGACATCGGCAACAATGCAACAACCTTGCAAGTATCTGATGTAACAGATTGGTTGGAGGGGTACGAAACTGAGATCTATACTTTAATGTCTTCTAGCAACACCGGTTCTGTTACAATTACCACTGCGGGCTCTGCACTATTCTACGGACAGGTCTCGGGGAACAGGGTATACGGAGCTTCTACAATTACTATTGGGTATGGGGATCGTGTCACTTTAACAGCTACATCTAGCGGTGACTTCCTAGTAAGAAGCTCTAATTCAATTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6263cee2520e75a3ddde540903c64c1314e50b473f8f189c8b9799b197f7fa2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8250
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank