Protein

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UniProt accession

A0A7M1RYV5 [UniProt]

Protein name

Internalin-like protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MADNIKRYNPNTGTWDISSSGKATGIVVDDPRLIDPELAEEGKTTESLNDVLARHDEALKKHGSYIAWLAEHGGGGSGGGGGATGDKITLTNGNIVKEGNINYLYSTVTTNIKLEYLITSSKNNKRYFITVTLDGNNIIEGKEAWTNNPGTLNIPQLDRFSSNSNHSVVITASDTDGFFAESYLLNIVEASIKLASSVSGNTATVGIDYFFTYSITSKIIGSDVNLVVTNVTNGASKTIELGKTTSTAPRQVNVNLWDLGSIIAGSSYTIQAQAFTSMNGQTVQSDKVTNRVVVEDGVNLVVLVEGITSKAEVDSGVERTKFSQSGNISFAFTPYLAGVSLIYYAIRIEHNGITKDIGYFDEGNYNDNQYVQRGKQQVFSYAIPTEGEVLGNWNITLRCWSEKGEPITDTVLACEVVSSSQALIADQNPNNSRYASWHIRQESFPQVSTTKVWTSNEPSFTVPGAIEPSGATTELNVYNTNGVLSGFLTKNGQSMLRISGEAYGVIDVQPFKDDTTTLNNWSRQGFGISCTFKSDRHPFSNRTIFFIGDYNTDEQFSEGIKVGLEDITWSYTDGNIKETMSCKIQQDVINTVDFIVNKNPGKMVVAIFINGILSTAREIKNDFTWRTSSKIYLGCDISNAGQIQNFADVNFYDIKLFRVPANDKQIVINAMNSKARATLLANGSIDFTKYNRMKLRNFFSTSDSEPNSTLWDDINQTYANVNFNSLISDTTKVLPVDIMLINCANTGFTRVVFEEIGGQNNNWYTGCTMSYFSPTSGKSSSEYTTDVAVSKQGTSTMNNLIKNLEIRFDKMLKDDDGGNLDYELFQPRETWFPERQFTLKADVVDSAHANNASIGKWINDNSDFLFEKTPPMEELEAHRPVDTRDRTVKDKVTIKQTLEGFPIILLIQFDGEETQTMLGIYSFNLGRGAYYNMGFRFMKDFTTKIKNTAGEYVDNKLPAFVTSYHTYAQDELFGNIDQRKVYSYEFGENANIIVDGDKILPLALFMQDDLSIIKHVGEFKYNGGNWLEPTAPVTDDNVWRALQELFSIFAQMTTSTVKKYIWNESVGGYEETEGEYPAQSSWSTLAAELDTKFSIRNAFSYLLVCVKYGLVDSLGKNMTIVCYDINGSKKWFIRFYDMDTANGLDNVALESVAKTAWLDKFSNNDKNNVNSLVITKNAADGGYDTYSSRMWDVLRDTVFANTGVYDNSLEGLWDLWRNNDNICKDINNYVDNYFAAQTVNCGELLFNYDYNVKYLTAYVGEAGGEASYANIEFLHGTRIEYVRNWLKKRVWFFDGVFKYNNAANIQPYNNKGTFSAGGAEATNPKLIITSNCPAIFVVNIGNTTDTRYFLEEGKPTEIRLSPISSFNTQITINNTPQINDIEGLGEMRFQRFMSTMKLPSFSKLDLSSVDTLSDSPIPFETVFVNDEGYSDVRHIDLSNTKFWSGNIGQGTFTVNIEKYTKLKDLNISSSIVTSISLPNASLALLNITNSTVEGISLVNQPFLDRLDFSGCKRLKTVTIDSCDKITELNLSNLGDLHTVRITSCPNLKSIICTNNINLTTFNVSNCNNVEIINVSQCTNESLTVYIVGAPNIKELNVSSTNTPNDIQVASSLPNLRTLNISNSQVSAIQYGNAAIPTYKENKIFDISKLNLTSLSVQNAKGVHYFKFDNNRNTPFNVGDSFFVGCSNLKRIFGHIKLNGTSIFAQCGNFYIHEPKEKVEGITPNYNGEWFGSDTSTTEGKTAWDNNTDLGTNFTIGTTNCISMFTATNCSIYDVYYFLYKCDNVTTLNSCFASAKNVKWDLLDSPNRDMFNHCTKVVTMDSLFWGLQAQDFKILTSTYDYGSTEHNGLFSPLVDLQAMNSIFYFGGTRYTSPAFLAKFKGNVPSKLKRLSSFSAGTIKFVDNINDCPSDSTIDEHLVSADCGTLLANLPDLEYLNSMFNNSNIYFNQITDEDVEDGVKYCPLFYKNTKLKYIRNSFKGLVNSTGSLYNIFGGTVKNKTQVRFPTALYGIYDSFSLGSGSNVIFPIHNSMFSRLRNSLKYITGQQAINESTLGSFQGFTKQFVKEEEEAFPYDVFTGCNAIVEIPGFFSKLVLPANSVIELPLNSFKTNYNLTNISYLYYDMKNCKYSLTGKGFSNCKLINVHRCFSEIETSFVKKGFIPYGLFYMEQTSNVSYKGWNELDAASQNITENYGIDSDGNWIESAEMPVEITYSKQRTRPRKTIVNMSYCLERFQSTEAQGYTGNYGNFTPSNYGDIIVPNEKYNPVKYILNPNYDPREYLDEEQTMINYNRDIHRVILNKDYDKYEYAWNEYAYDGLSGLEDIILNSSLYTAVSNGTINCSPVIPDVFKDAAASIAPPSSVHANRKVLNYLCSPDLFYYCTNETNMVIEGVFSGSGRPNGDSTYDYFNYGIRGRIPTNLFKPVSNVTDLSMTFHRCPLILPYKWNNSTGDIGEMFSKQMFAGLTKLTNISYMFYFCVIPADVIVPVEFVIDCINLQDISCLFLAAQFESTASQAQQVDDNIFAKNVNLRNISYAFASGQSQGDWSGRSPKKISSTLFNANKHKQLTNVTGVFYNATSTTGSVPEFWNWLNNLSSVNRANVFYAMRKANLTNGNNVPSRWDTGMV

Physico‐chemical properties

protein length:	2622 AA
molecular weight:	293159,81270 Da
isoelectric point:	5,13054
aromaticity:	0,11785
hydropathy:	-0,30523

Domains

Domains [InterPro]

DC_0724
ATT
1–512

DC_0724 IPR013320 IPR032675 DC_0669

DC_0619
STR
581–1392

DC_0619 SSF52058

IPR050648
Unmapped
1449–1804

IPR050648

A0A7M1RYV5

1 2622

Architecture

ATT

STR

RBD

ATT 1-512 | STR 519-1708 | RBD 1710-2622

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0724	ATT	DC_0724	1	512	Novel HMM	DC_0724	N-terminal	Low	Positional only	3 proteins / 3 hits
IPR013320	STR	IPR013320	519	685	Merged direct domain	Concanavalin A-like lectin/glucanase domain superfamily	Central	Low	Positional only	237 proteins / 237 hits
DC_0619	STR	DC_0619	581	1392	Novel HMM	DC_0619	Central	Low	Positional only	8 proteins / 8 hits
IPR032675	STR	IPR032675	1357	1708	Merged direct domain	Leucine-rich repeat domain superfamily	Central	Low	Positional only	55 proteins / 55 hits
SSF52058	STR	SSF52058	1394	1691	Merged direct domain	SSF52058	Central	Low	Positional only	12 proteins / 12 hits
IPR050648	Unmapped	-	1449	1804	InterPro	F-box/Leucine-rich repeat	-	-	-	-
DC_0669	RBD	DC_0669	1710	2622	Novel HMM	DC_0669	C-terminal	Low	Positional only	46 proteins / 46 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

A0A7M1RYV5

1 2622

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	10	10	0,1705
Central domain	11	283	274	0,5273
C-terminal	284	2622	2338	0,0640

Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-10

Central
11-283

C-terminal
284-2622

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	uncultured phage cr107_1 [NCBI]	2772061	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

7189ca4044e2cfa4bab55b3b982e331b4b3d3a10d904b306380a1fc17ba439ca

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6592

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence