Protein

View in Explore
Genbank accession
QXO06518.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MDSTDNSKATSIETNQYIKNPKYTTKEAIDKFVNLLILGRYTEKDLSDALNYCLIRSTESFDNIDSIKEAIEELKKDSEAFKIFIDNTNKLLDAIQDINKEQTAEIDKINEFLKTAVTLDTEQTITGTKTFNKIYVPNPTESKQAANAQYVIDYVKEQLSKTIGDLNNLKTESKDLIINAINEVLDNLNAYKETINETTINQMIDTKLNPLIERITTIESTADYTKELAEANKQAIEDLNTKVVDNTSDITDINRRLEEAVFYSKIDDTRKTIQLKNYDSISGVSTTGEGINIAMVSKWDKVDLGSNQIPINLNGSETRPTYNDSKEIALIDDVKLKADASNVYNKSEIDTKLDTKADSNTVYNKEDSDARFVSLTENQNIQGNKVIEGIWEFNGILSKPKQLATTEYVVNYAKTYANQKVGDLASLKTEAKDTAVSAINELFDKIESGNTDSKQLIHKEYLDKNIADNVAYNISNTPLVPYNDVSSLNTKNIGVRISATTNNSSYSSGDTVVVSNFKIKLKGDDEYLKPYGVEVVDRENNKIGLNLIGDDTVYNDNDALLSTRPSDFNSSNVDLSSGSNAVAAVKTNGAYDYSGVYEICNPFREYNKKYCVFLSSDGLKNPYYQVDISSSKQVDNISFQLFGTSATNPFLYSKDCKIELFVENTVVKTFNVKGSSENNSPVNINIDYKDGMFLISVLDSINYINNRINKNAELLTGLGKPNFSLNPNKIGSLYSDTTNKAVYMCIDNTFGANKWVNIVTGDEIKPNLRKIEITCNVNLRSGQYGGCMSGVKLGFDNGYASTKQIVKGLNNGQILWSLDGLGNLASYSEVGSLSPSGNDIKGDVTTTGIYNDPSYH
Physico‐chemical
properties
protein length:856 AA
molecular weight: 94998,60650 Da
isoelectric point:4,77683
aromaticity:0,07944
hydropathy:-0,50561

Domains

Domains [InterPro]
DC_0608
ATT
1–385
DC_0608 DC_0608
Coil
Unmapped
181–201
Coil
QXO06518.1
1 856
Architecture
ATT
ATT
ATT 1-385 | ATT 465-855 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO06518.1
1 856
Domain Start End Length (AA) Confidence
N-terminal 1 471 471 0,9949
Central domain 472 716 246 0,7792
C-terminal 717 856 139 0,4030
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-471
Central
472-716
C-terminal
717-856

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-14
[NCBI] 		2780166 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO06518.1 [NCBI]
Genbank nucleotide accession
MW074126.1 [NCBI]
CDS location
range 133019 -> 135589
strand +
CDS
ATGGACAGCACAGATAATTCTAAAGCTACAAGTATTGAAACAAATCAATATATAAAAAATCCAAAATATACAACAAAAGAAGCTATTGATAAATTTGTTAACCTATTGATCCTGGGTAGATACACTGAAAAAGATTTATCAGATGCTTTGAACTATTGCTTAATACGTAGCACAGAAAGTTTTGATAATATAGATTCTATAAAAGAAGCTATAGAAGAACTTAAGAAAGATTCAGAAGCTTTTAAAATATTCATAGATAATACAAATAAACTTTTAGATGCTATTCAAGATATTAATAAAGAACAAACTGCTGAAATTGATAAAATTAATGAATTCTTAAAAACAGCAGTAACTTTAGATACTGAACAAACTATTACAGGAACTAAAACATTTAATAAGATTTATGTTCCAAATCCTACAGAATCTAAACAAGCTGCTAACGCTCAGTATGTTATAGATTATGTTAAAGAACAATTAAGTAAAACTATTGGAGATTTAAATAATTTAAAAACTGAATCTAAAGATTTAATTATTAATGCTATTAACGAAGTTCTTGACAATTTAAATGCTTATAAAGAAACTATAAATGAAACTACTATTAATCAAATGATTGATACTAAGTTAAATCCATTAATAGAAAGAATTACAACAATTGAATCTACTGCGGATTACACCAAAGAATTAGCAGAAGCTAATAAGCAAGCTATTGAAGATTTAAATACAAAAGTAGTTGATAATACTAGTGATATAACGGATATCAATAGAAGACTTGAAGAAGCTGTTTTCTATAGTAAAATTGATGATACTCGCAAAACTATACAACTTAAAAATTATGATAGCATTTCCGGAGTTAGTACTACTGGTGAAGGTATCAATATTGCTATGGTTTCTAAATGGGATAAAGTAGATTTAGGATCTAATCAAATTCCTATTAACTTAAATGGATCGGAAACTAGACCAACTTATAATGATTCCAAAGAAATAGCTTTAATAGATGATGTTAAGTTGAAAGCAGATGCTAGCAATGTTTATAATAAATCTGAAATTGATACTAAATTAGATACTAAAGCAGATTCAAATACAGTTTATAATAAAGAAGATTCTGACGCTAGATTTGTTAGTTTAACTGAGAATCAAAACATTCAAGGCAATAAAGTTATAGAAGGTATTTGGGAATTTAATGGAATATTGTCTAAACCAAAACAATTAGCAACTACTGAATATGTGGTAAATTATGCTAAAACATATGCTAACCAAAAAGTCGGAGATTTGGCAAGTCTTAAAACAGAAGCTAAAGATACAGCAGTGTCTGCTATCAACGAATTATTTGATAAGATTGAATCTGGTAATACAGACAGCAAACAACTAATACATAAAGAATACCTAGATAAAAATATTGCAGACAATGTAGCATATAATATTAGTAATACTCCATTAGTACCTTACAATGATGTTAGCTCTTTAAACACAAAAAATATCGGTGTAAGAATATCTGCGACAACTAATAACTCTAGTTATTCATCTGGTGATACAGTAGTAGTTAGTAATTTCAAGATAAAACTTAAAGGAGATGATGAATACCTTAAACCTTATGGGGTTGAAGTTGTTGATAGAGAAAATAATAAAATAGGTTTAAATTTAATAGGAGATGATACAGTATATAATGATAATGATGCTTTATTATCTACAAGGCCTTCTGATTTCAACTCATCTAATGTAGATCTTTCTAGTGGTAGTAATGCTGTAGCTGCAGTAAAAACAAATGGTGCATACGATTATAGTGGAGTATATGAGATTTGTAATCCTTTCAGAGAGTATAATAAAAAATATTGCGTATTTTTAAGTTCTGATGGATTAAAAAATCCTTACTATCAAGTTGATATAAGTAGCTCCAAACAAGTTGATAATATATCTTTTCAATTATTTGGAACTAGTGCTACAAATCCTTTTTTATATTCTAAAGACTGTAAAATTGAGTTATTTGTAGAAAATACTGTTGTAAAAACCTTCAATGTTAAAGGAAGCTCTGAAAATAATAGTCCTGTAAATATTAATATAGATTATAAAGATGGTATGTTCTTAATATCTGTTCTTGATTCTATAAATTATATAAATAATAGAATCAATAAAAATGCAGAGTTACTTACAGGGTTAGGGAAACCCAATTTTTCACTAAACCCTAATAAAATAGGCTCTCTATACTCTGATACAACAAATAAAGCTGTATATATGTGTATAGACAATACTTTTGGTGCTAATAAATGGGTGAATATAGTAACAGGTGATGAAATTAAACCAAACCTTAGAAAAATAGAAATCACTTGTAATGTAAACTTAAGAAGTGGCCAATACGGTGGTTGTATGAGTGGTGTAAAACTAGGATTTGACAACGGGTATGCTTCTACAAAACAAATCGTTAAAGGATTAAATAATGGTCAGATATTATGGTCATTAGACGGTTTAGGTAATCTAGCTAGTTATTCTGAAGTAGGTTCTTTATCTCCTAGTGGTAATGATATCAAAGGTGATGTTACTACTACTGGAATATATAACGACCCTTCATATCATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e87af3bd5dcd08700a4f0682be5b66a234e4b96e99c754c242c5d9acfa3292a3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank