Protein

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Genbank accession
QJT71428.1 [GenBank]
Protein name
Peptidase S74 domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MAEKKRPWRTRFGIDVKGESFLRSLLQVSGSVSFTGDGKLFMPESDRTAGELNEVRINPNTNEMEIYRNGGWLSVTRTVVRWDADTTTFIGNAGNTDVTIPHVESGVLANVPSYRATSRGTQSSPAYNFSNATNSGMWISSDNNTLILTSQGLDFMKASSTDTNLFAGGSETIGMTSTAITLKKAVTANLAVTHEESASFKDGFTVPAGATTPTLNTGMTIATGNLEITSGQITAGGNVVAFSDRRVKKDEKPIESIEEPFMKVKVYHYFNEATGSYDVGFMADEMQELFPRLVENLGDVKVNEKELKDFHGVRYASGVPYLWAMLQSAMKRIEALEAKE
Physico‐chemical
properties
protein length:340 AA
molecular weight: 37139,24510 Da
isoelectric point:5,34761
aromaticity:0,08529
hydropathy:-0,33353

Domains

Domains [InterPro]
DC_0421
STR
9–339
DC_0421
IPR030392
CHP
243–294
IPR030392
IPR030392
CHP
243–340
IPR030392
QJT71428.1
1 340
Architecture
STR
STR 9-340
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJT71428.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 77 77 0,7354
Central domain 78 276 200 0,0859
C-terminal 277 340 63 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-77
Central
78-276
C-terminal
277-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VcorM_GR28A
[NCBI] 		2711163 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT71428.1 [NCBI]
Genbank nucleotide accession
MT366762 [NCBI]
CDS location
range 102457 -> 103479
strand -
CDS
ATGGCTGAGAAGAAAAGACCGTGGCGCACACGCTTCGGCATTGATGTAAAGGGTGAGAGCTTCTTACGTAGCCTACTACAGGTGAGTGGCTCAGTTTCCTTCACGGGTGACGGCAAACTGTTTATGCCTGAGTCAGACCGGACAGCTGGTGAGCTTAACGAAGTGCGCATCAACCCAAACACCAACGAAATGGAGATTTACCGTAACGGTGGATGGTTGAGTGTTACCCGCACTGTCGTACGTTGGGATGCTGACACCACTACATTCATTGGTAACGCGGGCAATACAGACGTGACTATCCCACACGTGGAAAGCGGGGTGTTGGCCAACGTACCTTCTTACCGTGCCACCAGTCGTGGTACACAAAGTTCTCCGGCGTACAACTTTTCCAACGCTACCAACAGTGGTATGTGGATTAGCTCAGACAACAACACGCTTATCTTAACCTCCCAAGGTCTTGATTTCATGAAAGCCTCGTCGACAGATACCAATCTGTTTGCAGGGGGTTCTGAAACGATTGGGATGACCAGTACGGCTATTACTCTAAAGAAAGCCGTGACTGCTAATCTGGCTGTGACGCACGAGGAATCTGCTAGCTTTAAGGACGGGTTTACTGTACCAGCGGGGGCTACTACGCCGACACTGAACACTGGCATGACAATCGCGACAGGTAACTTGGAAATCACATCCGGTCAGATAACAGCAGGTGGTAACGTTGTAGCATTCTCTGACCGCCGAGTCAAGAAAGACGAGAAACCGATTGAGAGCATCGAAGAGCCGTTCATGAAGGTCAAGGTCTATCACTACTTCAACGAGGCAACAGGGTCGTATGACGTCGGTTTCATGGCTGATGAAATGCAGGAGCTGTTCCCACGTTTAGTTGAGAACCTAGGGGATGTCAAAGTAAACGAGAAAGAGTTGAAGGACTTCCATGGTGTTCGCTATGCTAGTGGTGTACCTTATCTTTGGGCCATGCTACAGTCAGCAATGAAGCGCATCGAAGCCTTGGAAGCTAAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f96d7af4d3bcc2dfd009ded62e092dca9aab111c7f98ce21fb20c8cec03e8862
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7260
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of Vibrio coralliilyticus phages from Hawaiian seawater Richards,G.P. 2017-10-12 — GenBank