Protein

View in Explore
Genbank accession
ACH91317.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQTEWNFNYANYVQNVSLPPGRYKLECWGACGGAVDTSDWTDCAKGGYSKGEIVFKKRTNLQICVGQSGYEKVSEGSSLTRSGFNGAGAAGKVTTGSFAYSKYGGGATDIRLYHPSATWGNTESLLSRILVAGGGGGMKNNFASARSIGHGGGYVGVNGVGRDRDFCGGGSQYQGGTSYDTEEYHGSLGKGGYGNIGIGGGGGWYGGAGSYSNECGGGGSGYALNKDSYKAPGYIPTPEYYLENIVMTTGGNTTKADGYAKITLLQALPFLTVSSYNSITATFKADHTDPTLLTKIEYFIDDVLKETITTDLTLEKTINYTLEDNALHTLKIVVTDSNNATAEKVLSLSKNIMPLPENVNLQDISSKLIEVNAGFKTGKTSIINTLALKNIEASLNNTLVELSEKIKTGFDSSDASVQDLMNQLTQANNTITQLNSQFKVAGGTSVAQRSDGTKIAYEYKRSTTSKFGGWLKINGLAFKPNIFVADCEYYDSDYRVDYKFFTFACCGFTTSGKQDFVAVAIYSRSSGSDKYTGDGFIYNNNEGDVWFNANGVQVPAYLPGGSESFTYAWRAVKFMNT
Physico‐chemical
properties
protein length:577 AA
molecular weight: 61864,93730 Da
isoelectric point:5,88445
aromaticity:0,11612
hydropathy:-0,34523

Domains

Domains [InterPro]
IPR055163
STR
15–265
IPR055163 DC_1400
Coil
Unmapped
417–437
Coil
ACH91317.1
1 577
Architecture
STR
STR 15-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridioides phage phiCD27
[NCBI] 		2849704 Uroviricota > Caudoviricetes > Colneyvirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACH91317.1 [NCBI]
Genbank nucleotide accession
EU719189.1 [NCBI]
CDS location
range 22914 -> 24647
strand +
CDS
ATGCAGACTGAATGGAATTTTAATTATGCTAATTATGTACAAAATGTTTCATTGCCACCTGGGCGATATAAATTAGAATGTTGGGGTGCTTGTGGTGGTGCTGTCGATACAAGCGATTGGACTGATTGTGCAAAAGGTGGTTATTCAAAAGGTGAGATTGTATTTAAAAAAAGAACTAATCTACAAATTTGTGTCGGTCAATCTGGTTATGAGAAAGTTTCTGAAGGTTCAAGCCTTACTAGAAGTGGTTTTAACGGTGCAGGCGCTGCTGGCAAAGTTACTACTGGTAGCTTTGCTTATTCTAAATACGGTGGTGGAGCAACTGATATAAGACTTTATCATCCTAGTGCAACTTGGGGTAACACTGAAAGTTTGCTTTCACGCATACTTGTTGCAGGCGGTGGAGGAGGTATGAAAAATAATTTTGCTTCTGCTCGTTCTATTGGTCATGGTGGTGGTTATGTAGGTGTTAATGGAGTTGGTCGTGACAGAGATTTTTGTGGCGGTGGTTCTCAATACCAAGGTGGAACAAGTTACGACACAGAAGAATACCATGGTTCATTAGGAAAAGGAGGTTATGGTAACATAGGAATAGGTGGTGGAGGGGGTTGGTACGGTGGTGCTGGTTCTTATTCTAATGAATGTGGAGGTGGTGGAAGTGGTTACGCACTAAATAAAGATAGTTATAAGGCACCCGGATATATACCAACACCTGAATATTATCTTGAAAATATAGTCATGACTACTGGAGGTAATACTACTAAAGCAGATGGTTATGCTAAAATAACATTACTACAAGCATTACCATTTTTAACAGTATCTTCTTATAATTCCATTACAGCTACATTTAAAGCTGACCACACAGACCCTACATTGCTTACAAAAATAGAATATTTTATAGATGATGTGTTAAAAGAAACTATAACAACCGATTTAACTCTTGAAAAAACAATTAACTATACATTAGAAGATAATGCACTACACACACTTAAGATAGTTGTTACAGACAGTAATAATGCTACAGCAGAAAAAGTGTTAAGTCTAAGTAAGAATATAATGCCACTGCCCGAAAATGTAAATTTGCAAGATATATCTTCTAAACTAATTGAAGTTAACGCAGGATTTAAAACTGGTAAAACAAGTATTATAAATACTTTAGCATTAAAGAATATAGAAGCAAGTTTAAATAATACACTTGTTGAGTTGTCAGAGAAAATAAAAACAGGTTTTGATAGTTCAGATGCTAGTGTACAGGATTTGATGAATCAGTTAACACAAGCTAATAATACCATAACACAGTTAAATTCTCAATTTAAAGTAGCAGGTGGTACTTCTGTTGCACAAAGAAGCGACGGAACTAAAATTGCTTATGAGTATAAAAGGTCTACAACTTCTAAATTTGGTGGATGGCTCAAAATTAATGGTTTAGCTTTTAAACCTAATATTTTTGTAGCTGACTGCGAATATTATGACAGCGATTATAGAGTTGACTATAAATTTTTTACATTTGCTTGTTGTGGTTTTACTACAAGTGGTAAACAAGATTTTGTTGCTGTAGCAATTTATAGTCGCTCAAGTGGTAGCGATAAATATACTGGTGATGGTTTTATTTATAACAATAATGAAGGGGATGTATGGTTTAATGCTAATGGCGTTCAAGTTCCTGCTTATTTACCAGGTGGTAGTGAAAGTTTTACTTATGCTTGGAGAGCTGTTAAATTTATGAATACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a484425afd0fab264ca3ecf96b4e95d1b13ab72745a7ba4fd1888beaf45c5cc
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8959
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular characterization of a Clostridium difficile bacteriophage and its cloned biologically active endolysin Mayer,M.J., Narbad,A. and Gasson,M.J. 2008 18708505 GenBank