Protein

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Genbank accession
XYM49039.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASGLLIDLNDGNPAMQITAGMRCPSFCNLVANAWDEKVVNVDGYVPGAQIIVIPRDPVSIQNRGTNLVPTIGMQSGYSQNGSQLTFSTWWSDNWGRDRLYDLTICQILPTASGQGLYIADSTDFTAIPDSTRAGFCVWAGTITFTGQWRTPDTGYDRNKYMVFARWSADGVTVEYDGNNIYARNETNGEEGDATVTMRVAIFASGVAPQAGTGLNFFNAAGQCTFSTVRRPFIFRNRFYNPSWDYQDIGAGMILLGRYGFRSRVSGDRCRAKFAGLMMSGNSVRCASGITKSNWTSRYSVVQDRLVGMSVPIIENMY
Physico‐chemical
properties
protein length:318 AA
molecular weight: 35011,03060 Da
isoelectric point:7,48464
aromaticity:0,11635
hydropathy:-0,18648

Domains

Domains [InterPro]
IPR045604
STR
4–296
IPR045604
XYM49039.1
1 318
Architecture
STR
STR 4-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM49039.1
1 318
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0588
Central domain 11 209 200 0,0151
C-terminal 210 318 108 0,9926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-318

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Kpn01BRG
[NCBI] 		3403491 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM49039.1 [NCBI]
Genbank nucleotide accession
PV081216 [NCBI]
CDS location
range 24460 -> 25416
strand +
CDS
ATGGCAAGCGGTTTACTTATCGATCTCAACGATGGTAATCCGGCGATGCAAATCACGGCGGGCATGCGTTGCCCGTCTTTTTGCAACCTGGTTGCTAACGCGTGGGATGAGAAAGTGGTTAACGTGGATGGCTATGTGCCAGGGGCGCAGATTATCGTCATCCCTCGCGATCCCGTATCCATCCAGAACAGAGGGACAAACCTTGTTCCAACTATCGGGATGCAAAGCGGCTACTCGCAGAACGGATCCCAGCTTACGTTTTCTACGTGGTGGTCAGATAATTGGGGGCGTGACCGCCTCTATGATTTGACAATCTGCCAGATCCTGCCGACGGCCAGCGGCCAGGGGTTATACATTGCCGATTCCACCGACTTTACCGCAATCCCCGACTCAACGCGGGCCGGGTTTTGCGTGTGGGCCGGAACGATCACGTTTACAGGGCAATGGCGAACTCCCGATACCGGATACGACCGCAATAAGTATATGGTGTTTGCTCGCTGGAGCGCCGACGGCGTGACGGTAGAATATGACGGAAATAACATCTACGCCAGGAATGAAACGAACGGCGAGGAGGGCGACGCTACGGTTACAATGCGGGTGGCTATCTTCGCCAGCGGAGTTGCGCCGCAGGCGGGAACCGGATTGAACTTTTTCAACGCGGCGGGACAATGTACCTTCTCAACGGTTCGCCGTCCGTTTATCTTCAGGAACCGATTCTATAACCCGTCGTGGGATTATCAGGATATCGGCGCGGGAATGATTTTGCTTGGCAGGTATGGATTCAGAAGTCGGGTCAGTGGTGATCGGTGTAGGGCAAAATTTGCCGGGTTAATGATGAGCGGTAACAGCGTAAGATGTGCCAGCGGCATCACAAAATCTAACTGGACGTCAAGATATAGCGTCGTCCAGGATCGATTAGTCGGCATGAGCGTTCCCATTATTGAAAACATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c43f420b48b2e08410814a1e9439a1d672c6960635e5fc19f7f6bcd03dcd52c8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8711
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50