Protein

View in Explore
Genbank accession
YAF82582.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MAGTLINITDAGRAALVALGNTGTAAHRVVEIGLGAAPFAFDKGMKTMPGERKRVTTFGGDNVAPDTVHVVIQDESNDQYSLYAFGLYLDNGVLFGVYVQDTPILEKSPAALMLLATDTVFTTIDAAKLEFGPATFLNPPATTERKGVVELATQAEVDVGDDDTRAITPKTARRRYAALSGAAFDGPVRVVADVDERAAQLDVSPETAGAGKEGKVRLFGTFGDASLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFASGGRVLIGERADDGKTALQVRGGVDASEGVAARAIDAGGAGGQFRAVYDGYGAFIRNDGRSVYFLSTPKGAPDGGFNDYRPFSWSLSTGHVIVDGSGAGTVFGGAVDVARDLEVGRQASEGHIKLGPVDGYLYANPVSTGWWSPAGSSYQYIFADHTFRIDGRMAWHEGNLDPLDKSKGGTLAGDVSFAPGKRLVLAEGSPAAPSLTFGNDGAPDTGLYHAADGEFGVTCNGRAVVRFSPALVTFEQPVAVPTPPAADRSTRAATTEWVRTVLSATTIGQIVFEPRTTVRPGFLKANGVLVNRADYPELWAYAQASGALVSDADWMKDRWGCFSTGDGATTFRLPELRGEFIRCWSDARGGVDATRQIGAFQGDQNHTHAHGAAASEAPDHVHTAWTDVQGWHGHHGWTNAVGDHQHVSPWGEHPQMYNPPWGTWGAANNRGAEGSDNDNVYGMTSPAGNHNHEFNTEGNGNHGHAVGIGGGGRHAHTIAVQPDGGDEARPRNVALLALIRAY
Physico‐chemical
properties
protein length:790 AA
molecular weight: 83309,08040 Da
isoelectric point:5,43417
aromaticity:0,08734
hydropathy:-0,29051

Domains

Domains [InterPro]
DC_0662
STR
115–695
DC_0662 DC_1872
IPR048390
ATT
295–359
IPR048390 SSF88874
IPR037053
ATT
552–631
IPR037053
YAF82582.1
1 790
Architecture
STR
ATT
STR
ATT
STR
STR 115-294 | ATT 295-359 | STR 360-551 | ATT 552-631 | STR 632-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_HM217
[NCBI] 		3461034 Viruses >
Host Burkholderia pseudomallei
[NCBI] 		28450 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF82582.1 [NCBI]
Genbank nucleotide accession
PX105065.1 [NCBI]
CDS location
range 26266 -> 28638
strand -
CDS
ATGGCAGGAACCCTCATCAACATCACCGACGCCGGCCGGGCGGCACTCGTCGCCCTCGGCAACACCGGCACGGCCGCGCATCGCGTCGTCGAGATCGGGCTCGGCGCCGCGCCGTTCGCGTTCGACAAGGGCATGAAGACCATGCCGGGCGAGCGCAAGCGCGTGACGACGTTCGGCGGCGACAACGTGGCGCCGGACACGGTGCACGTGGTGATCCAGGACGAATCGAACGATCAATACTCGCTCTATGCGTTCGGCCTGTACCTCGACAACGGCGTGTTGTTCGGCGTCTACGTGCAGGACACGCCGATTCTCGAAAAATCGCCCGCCGCCTTGATGCTGCTCGCGACCGATACGGTTTTCACGACGATCGATGCGGCGAAGCTCGAGTTCGGGCCCGCGACGTTCCTGAACCCACCGGCGACGACCGAGCGCAAGGGCGTGGTCGAGCTCGCCACGCAGGCTGAAGTCGACGTCGGCGACGACGACACGCGCGCGATCACGCCGAAGACGGCCAGGCGGCGCTATGCGGCGCTGTCGGGCGCGGCGTTCGACGGTCCTGTGCGCGTCGTCGCCGATGTCGACGAGCGCGCCGCGCAGCTCGACGTGTCGCCGGAGACGGCCGGGGCCGGCAAAGAGGGCAAGGTTCGCCTGTTCGGCACGTTCGGCGACGCGTCGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTGCGCGCGGGATTCGACGCCGGCGCGTGGGGGCGCGAGTACGTCGACGTTTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGACGCGAAGCAGAAGCGCGTCGCACGCTTCGCGTCGGGCGGCCGCGTGCTGATCGGCGAGCGCGCGGACGACGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCATCGGAAGGCGTCGCCGCGCGCGCGATCGACGCCGGCGGCGCCGGCGGGCAGTTCCGCGCCGTGTACGACGGCTACGGCGCGTTCATCCGCAACGACGGCCGGAGCGTCTATTTCCTGTCGACACCGAAGGGGGCCCCGGACGGCGGCTTCAACGACTATCGGCCGTTCTCGTGGTCGCTGTCGACAGGGCACGTGATCGTCGACGGCAGCGGAGCGGGCACGGTCTTTGGCGGCGCCGTGGACGTCGCGCGCGACCTCGAAGTCGGTCGGCAGGCAAGCGAAGGGCATATCAAGCTCGGGCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGTTGGTGGTCGCCGGCGGGATCGTCCTATCAGTACATCTTCGCCGATCACACGTTTCGCATTGACGGGCGGATGGCGTGGCACGAAGGCAATCTCGACCCGCTCGACAAGAGCAAGGGCGGCACGCTGGCCGGCGATGTGTCGTTCGCGCCGGGCAAGCGGCTCGTGCTCGCCGAAGGCAGCCCGGCCGCGCCGTCGCTCACGTTCGGCAACGACGGCGCGCCGGATACCGGCCTCTATCACGCAGCCGACGGCGAGTTCGGCGTGACCTGCAACGGGCGCGCCGTCGTGCGGTTCTCGCCGGCGCTCGTGACCTTCGAGCAACCCGTGGCCGTGCCGACGCCGCCGGCGGCGGATCGATCGACGCGCGCCGCGACGACGGAATGGGTGCGCACGGTTCTGTCGGCGACGACGATCGGCCAGATTGTCTTCGAGCCGCGCACGACCGTGCGGCCGGGCTTCCTCAAGGCGAACGGCGTGCTCGTGAACCGTGCCGACTATCCCGAGCTGTGGGCGTATGCGCAGGCGAGCGGCGCGCTCGTCTCCGATGCGGACTGGATGAAGGATCGGTGGGGCTGCTTCTCGACCGGCGACGGCGCGACGACGTTTCGCCTGCCCGAGCTGCGCGGCGAATTCATTCGTTGCTGGTCCGATGCGCGCGGCGGCGTCGACGCGACGCGCCAAATCGGCGCCTTCCAGGGCGACCAGAACCACACGCACGCACACGGCGCCGCGGCAAGCGAAGCGCCGGACCACGTCCACACCGCGTGGACCGACGTGCAGGGCTGGCACGGCCACCACGGTTGGACGAACGCTGTGGGCGACCACCAGCACGTCTCGCCGTGGGGCGAGCACCCGCAGATGTACAACCCGCCGTGGGGCACGTGGGGCGCCGCCAACAACCGCGGCGCGGAGGGCAGCGACAACGACAACGTGTACGGGATGACGAGCCCGGCCGGCAACCACAACCACGAGTTCAACACCGAAGGCAACGGCAATCACGGGCACGCCGTCGGTATCGGCGGCGGTGGCCGGCACGCGCACACGATCGCCGTTCAGCCCGACGGCGGCGACGAAGCGCGCCCGCGCAACGTCGCGCTGCTCGCGCTGATTCGCGCCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82f3bd035f7e5afc1ed41e38dbc0ee5ad538beb4c571ce156adcd43f8f2ee043
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50