Protein

View in Explore
Genbank accession
ARB12452.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MNQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERVVDFSDGSVLRAADLNVSQIQSAHIAEEARDGQYYSLNLNDLGQFDAKGTKIIDLGAPTSPQDATTKLYVDTNDLALSQRILDEIKARAEGDIEMLRQAKMYSDSQIPGILPDGATSVGYWLPSATALMNDDSGHPVVRVRGFYTADDGGEGSWVWTNEVDAQKAGTHDILTASVYDKVGRRYRINITIGAVNAAQNGARRLTYAQATDRTTDDFVCLGQVISGITSLMPLPVSTNNSESGYIGDYRINLTISPGRYRIGKESGGIDSGMVINAWGARVHVVAGKSYTRAITGKWIHGLVHGYDQIKRKWEAVGKQAFWGSVSLKDVVINGGFWIGDHDLRTPASECSAGVGTLLLNPEGVIMNGVHQRNFNWVHVAMGAMIKETWYRTSKGRLFDDNELDYPYVMDFMTSNVPPVTRRFGNCNRVAYHGCKFESGRRGVFRNGVDWSGCYNTEIINNIAWRNPANADGSIPEFIAVLTGTAFHMSAGYMGPAAAKDLNAGVASVYSSTQNIKFDATYTEWTYAFMMISSWGFVDSASRLQGLSLDLVSVYKDNFADYGQIIFEEGCFPTMSEDGSATYPAGFKHFDTPQGQSPYVIGKPVRDVGAFRNQGFDFKYATNNVYLTTGTDWESWRDRPYAREMFNAFGLQINSGTAFLPLQNPADKSMTCIWYKDFTGNFDTRKVIQFITAATQEGPNADEALYKSYAERVVDFGNGYKMMMIPNKRLTAWDGIYTYARNASITVEVSADTPIALIAVEAYTGGVPLFPNGVPNYVPESSCASVVPTAPQVGFDSNLGGGLFFDGDVVGPWVHVRRNKVGRRITPQVTAGSVLSTRRVSGQGVTLESALKTAFTATIISSNTDTTTISIPTASLPSVAVGIPLYVQSGSSTGFTGLAHLHLRVMLANGKADNKYVVNGKLGEAGDNLTIDQSQIAAYTLLADFTQTAITAETMTLSGVARASAFRASVGVDVGYGGSSGPKVVAFYFNGGTTSTHAITATSLNGMSVNANGNLSINGHTFSTQDGTHTLGTAQNRWAAVWSANGTLQTSDERFKILDGDIPEELLDAWERYVKVKVYRMKSAVELKGPDARKHVGYIAQHVIEALTQAGLDWTKYGVVGFDEWKANSFGPAGNRYSLRYDQCAAIENAVLDRRIRRLEELLLNK
Physico‐chemical
properties
protein length:1242 AA
molecular weight: 135885,02670 Da
isoelectric point:6,18183
aromaticity:0,10306
hydropathy:-0,22238

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604 cd02795
DC_0778
STR
1–733
DC_0778 IPR044914 IPR036388
cd10144
CHP
1127–1231
cd10144
IPR030392
CHP
1127–1242
IPR030392
IPR030392
CHP
1127–1188
IPR030392
ARB12452.1
1 1242
Architecture
ATT
STR
RBD
ATT 1-127 | STR 128-733 | RBD 1061-1242
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB12452.1
1 1242
Domain Start End Length (AA) Confidence
N-terminal 1 294 294 0,9939
Central domain 295 1017 724 0,9825
C-terminal 1018 1242 224 0,8964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-294
Central
295-1017
C-terminal
1018-1242

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_IL33
[NCBI] 		1907783 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB12452.1 [NCBI]
Genbank nucleotide accession
KY652724.1 [NCBI]
CDS location
range 34190 -> 37918
strand +
CDS
ATGAACCAAGACATTAAAACAGTCATTCAGTACCCAGTGGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTTTCCCGCAAGTTCGTCAGAGTGTCACTAGTAGCTGACGACAACCGCAGACTGCTGAGTAATATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAAACTACCGGGTTCGACCGTGTGGAAATTCGCAGATTCACCTCAGCTTCAGAGCGTGTAGTAGACTTCAGTGATGGCTCGGTTCTCCGTGCAGCCGACCTTAACGTATCTCAAATACAGTCGGCACATATCGCAGAGGAAGCACGTGACGGTCAGTATTACAGCCTCAATCTTAACGACCTCGGACAGTTTGACGCTAAGGGTACTAAGATTATTGACCTAGGTGCACCAACGTCCCCACAAGATGCCACAACGAAACTGTATGTGGACACTAACGACTTGGCCCTTAGCCAGAGAATCCTCGATGAAATCAAAGCGAGAGCCGAGGGGGACATTGAGATGCTCCGTCAGGCAAAAATGTATTCCGACTCTCAGATTCCTGGAATTTTGCCGGATGGGGCCACGTCTGTCGGTTACTGGTTACCATCTGCAACAGCACTGATGAATGATGACTCTGGACACCCTGTGGTTAGGGTCCGTGGGTTCTACACTGCCGATGATGGTGGCGAGGGTAGTTGGGTGTGGACCAACGAGGTAGATGCTCAAAAGGCTGGGACACACGACATTTTAACGGCCTCGGTGTATGATAAGGTAGGTCGCCGCTACCGTATCAATATCACCATTGGGGCTGTAAACGCGGCACAGAACGGTGCCCGCAGATTAACCTACGCACAAGCTACCGACAGGACCACAGACGACTTCGTGTGCCTAGGTCAGGTAATCTCTGGTATCACCTCACTGATGCCCCTCCCAGTATCAACTAACAACAGTGAGAGTGGATACATTGGCGATTATCGAATCAACCTAACGATATCTCCGGGACGCTACCGTATCGGTAAAGAGTCTGGTGGGATTGACTCGGGCATGGTAATCAACGCGTGGGGCGCGCGAGTGCACGTTGTTGCTGGTAAGTCTTACACCAGAGCAATTACTGGTAAGTGGATTCACGGTCTGGTGCACGGATACGACCAGATTAAACGCAAGTGGGAAGCTGTTGGTAAACAAGCATTCTGGGGCAGTGTTTCCCTGAAGGATGTGGTAATCAACGGAGGCTTCTGGATTGGTGACCACGACCTGCGGACTCCGGCTTCAGAGTGCTCTGCTGGCGTCGGTACGCTCCTACTGAACCCTGAAGGCGTAATCATGAACGGTGTGCACCAGCGTAACTTCAACTGGGTCCATGTCGCTATGGGCGCAATGATTAAGGAGACTTGGTATCGCACTTCGAAAGGTCGTCTCTTTGATGATAACGAACTTGACTACCCTTACGTTATGGACTTTATGACCTCTAACGTTCCGCCAGTTACTCGCCGCTTCGGTAACTGCAACCGCGTGGCGTATCACGGGTGTAAATTCGAAAGCGGACGTCGTGGCGTGTTCCGCAATGGCGTTGACTGGTCTGGGTGCTACAACACCGAAATCATCAACAACATCGCATGGAGAAACCCGGCTAACGCGGACGGCAGTATTCCAGAGTTCATCGCCGTACTTACTGGTACTGCGTTCCACATGAGCGCTGGTTACATGGGTCCCGCGGCAGCTAAGGACCTCAACGCAGGAGTTGCCTCTGTCTATAGTTCTACCCAGAACATTAAGTTCGACGCTACGTACACCGAGTGGACTTATGCTTTCATGATGATTTCCTCATGGGGCTTTGTGGATTCAGCAAGCCGCCTTCAAGGCCTCTCTCTGGACCTTGTGTCTGTGTACAAGGATAACTTTGCGGATTACGGTCAGATTATCTTTGAGGAGGGGTGTTTCCCGACTATGTCCGAAGATGGCTCAGCTACTTACCCTGCTGGCTTTAAACACTTCGACACGCCTCAAGGGCAGTCTCCGTATGTTATTGGCAAGCCTGTACGAGATGTTGGTGCGTTTCGTAACCAAGGGTTCGACTTTAAGTACGCAACCAACAACGTGTACCTGACAACTGGAACCGATTGGGAATCGTGGCGAGACCGTCCGTATGCCCGCGAGATGTTCAATGCGTTTGGCTTACAGATTAACTCTGGTACTGCCTTCCTACCGTTGCAGAACCCAGCAGATAAGTCTATGACCTGCATCTGGTATAAGGACTTCACTGGGAACTTCGATACCAGAAAGGTTATCCAGTTCATCACTGCTGCCACACAAGAGGGGCCTAATGCCGACGAGGCTCTTTACAAGTCATACGCAGAGCGTGTTGTTGACTTTGGTAATGGCTACAAGATGATGATGATTCCAAACAAGAGACTGACGGCATGGGATGGTATCTACACCTACGCACGCAACGCAAGCATCACGGTGGAGGTGTCAGCAGATACTCCTATCGCACTGATTGCTGTCGAAGCGTACACTGGTGGTGTACCACTGTTCCCTAACGGTGTCCCTAACTACGTTCCGGAATCTTCATGTGCCAGCGTGGTACCAACAGCGCCTCAGGTTGGGTTCGACTCTAACCTTGGCGGCGGTCTCTTCTTTGACGGTGACGTTGTAGGCCCTTGGGTTCACGTTCGTCGTAACAAGGTTGGCCGCAGGATTACCCCTCAGGTTACTGCTGGTTCCGTATTGTCCACACGTAGAGTGAGTGGTCAGGGTGTCACCTTAGAGTCTGCCCTGAAGACAGCGTTCACAGCGACGATTATTAGCTCTAATACTGATACTACGACAATCTCCATCCCAACTGCGTCCCTCCCATCGGTGGCAGTAGGCATCCCGCTGTATGTGCAGTCAGGTTCATCCACTGGATTCACTGGGCTTGCCCACCTGCACCTCAGGGTGATGCTGGCTAACGGTAAGGCGGACAACAAGTACGTTGTTAACGGTAAGCTGGGAGAGGCTGGTGATAACCTCACTATTGACCAGTCTCAGATTGCCGCTTATACGCTTCTTGCTGACTTTACACAGACTGCCATCACAGCCGAGACCATGACTCTCTCCGGTGTTGCGCGTGCGTCTGCGTTCAGGGCCTCTGTAGGTGTGGACGTTGGGTATGGTGGTAGCTCCGGGCCTAAGGTTGTGGCTTTTTACTTTAATGGCGGAACCACTTCAACTCACGCCATCACAGCAACTTCCCTTAACGGAATGAGTGTCAATGCCAACGGTAACCTCTCAATCAACGGTCACACGTTCTCTACGCAGGACGGTACGCACACACTTGGTACTGCCCAGAATAGGTGGGCTGCTGTATGGTCAGCTAACGGTACGTTACAGACGTCAGATGAGCGCTTTAAGATTCTCGATGGGGATATCCCCGAAGAGCTTCTTGATGCTTGGGAGAGGTACGTGAAGGTCAAAGTGTACCGGATGAAGTCTGCGGTGGAGCTGAAGGGGCCGGATGCCCGTAAGCACGTTGGGTACATCGCGCAGCACGTGATTGAGGCTCTCACTCAGGCAGGACTCGATTGGACTAAATATGGAGTGGTTGGGTTCGATGAGTGGAAAGCTAACTCTTTCGGTCCAGCAGGTAACCGCTACAGTCTTCGTTATGACCAATGCGCCGCCATTGAGAACGCTGTACTGGACCGCAGGATTCGCCGTCTTGAGGAGCTTCTGCTAAACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19824024c9cb8d3b0337e12918848a225d703cf42e38655ac5bb496ac516432c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5132
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing and assembly of Klebsiella pneumoniae phages Labudda,L., Strapagiel,D., Karczewska-Golec,J. and Golec,P. 2017-11-09 — GenBank