Protein

View in Explore
Genbank accession
XCO39838.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSQPRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDRIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIVQVPSNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVSQYCDELVPDNRGEMEPRYLMDMVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNADAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALASASLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVSIITDQILDEILDSDAMKELQESAQDSASKLNDYANSIIQNALANDADVRVMRKENGKRKAEISHTTVLIANETEARAAEITQLKTQIDEDITSQITILNEALADESETRATQINQLQTQFGEDMEAGFTQVNEAIANESEARATSEAALDAKIGENSAALAQKLDSWANVDGVGSMYTMKLGLTYNGQEYNSGMALQLTAQGNNVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGQYIQSNNFISGQQGWSINKSGASEFNNVVVRGALFAASGNFGFDGGNGVVINGNGVTVNLDGGGRIVLGRF
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 126841,15780 Da
isoelectric point:4,58329
aromaticity:0,09391
hydropathy:-0,27800

Domains

Domains [InterPro]
DC_0014
STR
1–1150
DC_0014
IPR053171
Unmapped
3–868
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
627–713
IPR036116
XCO39838.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39838.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,9136
Central domain 501 1080 581 0,0606
C-terminal 1081 1150 69 0,6241
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1080
C-terminal
1081-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146036
[NCBI] 		3232216 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39838.1 [NCBI]
Genbank nucleotide accession
PP889486.1 [NCBI]
CDS location
range 16340 -> 19792
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCCAGCCGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTGCTGGCCGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGCGGCGTTCCGGTTCAGAACGAAGACGGGAGCTATAACTATGAGGGCGTCATTGCAGAATTTCGCCCCGGCACGCAAACGCAGAGCTACATCCAAGGCTTCAGTGAATCAAGCGCTGAATTCCAGGTTGCACGCGATGTGACCTTTAACACGCCTTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGTTCGGTAGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGCTATCAAACCTACTTGACCGACAGAATCGACGGGAAAAACACGACTGGCGGTTACGATCGCAGCATCCGCGTCAACTTGCCGCAAGACTTCACGTCGCAGGTTCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATCGATGCAAAATTCCGCTATCCGCTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTGTCCAGGTTCCGAGTAACTACGACCCTGTTAACAGGACGTATGCCGGAACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCGGCTTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGTCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGAGATGGAACCGCGTTACCTGATGGATATGGTCGTGCAGTCGCAGGTCGAAGCCTTCCAGTTGGTCAGGGATGTTTGTTCCGCCTTCCGTGGGATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGACAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTAGTTGATGGCGTATTCGTGCGAACTTTTCCGAGCGAAAAAACGATGTACACGTCGTGCAACGTGATGTTCGACGACGAAGAGAACCAGTACGAACAGGACGTTGAACCAGTATTCAACGCTGACGCTGCAATGCGGTTCGGTCACAACCCGACAAGCATCACGGCGATCGGTTGCACCAGACGGACAGAAGCAAACCGCCGTGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGCCTGGAAGGCATGATCCCGTCATGCGGCGATGTTATTTACGTTGCAGATCCGCACTGGCAATCAGCCTTCAACCTGGTGTTGTCAGGTCGCATTATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACTGACGACGGTAAGCCATTACGCCGAACCATTGCCAGCGTATCGGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACCTTCGCCATCACGGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGTATGAGCGTCGAGACGATGGTAATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGCAACTGGAACAACGTGCCGCGCACGGCGACAACGCAGGTTGATATTGAGGGGATTTATGCTGGCGAATATCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCGTCTCCGTGGTCTGCTTTGGCTAGTGCATCGCTGACCGGGAAAGTTGGAGCGCCGAAAGGGCCAATTAACCTTTTCGCGTCGGATAATGAAATCTTTGGGATTCGCGTTAAGTGGGCCATGCCTGAAGGCGCAGAGGATACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTCTGATTCCTTATCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTATGTGAACTGGTACAAGGCGCGAAGTGTCGACAGGATCGGCAACGTTTCACCCTGGACTGATTACGCTCGCGGTATGTCATCGACTGACGTTAGCATTATCACAGATCAGATCCTGGATGAAATTCTTGATAGCGACGCCATGAAGGAATTGCAGGAGAGCGCACAGGACAGCGCTTCTAAACTCAACGACTACGCGAACAGCATCATTCAGAACGCGTTAGCCAACGATGCAGACGTCAGAGTTATGCGCAAGGAGAATGGAAAGCGGAAGGCGGAAATCTCGCATACCACTGTGCTGATCGCTAACGAGACTGAAGCGCGGGCGGCTGAGATCACGCAGCTTAAAACGCAGATTGATGAAGATATCACGTCGCAGATTACGATCCTGAACGAAGCGCTGGCGGATGAAAGCGAAACGCGAGCAACCCAAATCAACCAGTTGCAAACGCAATTTGGGGAGGATATGGAAGCAGGGTTTACGCAGGTTAACGAGGCGATCGCAAACGAAAGTGAAGCGCGCGCAACGTCCGAGGCGGCGTTAGATGCCAAAATCGGCGAGAACTCCGCAGCGCTGGCGCAAAAGCTGGATTCGTGGGCCAATGTTGATGGCGTAGGTTCCATGTACACAATGAAGTTAGGGCTAACGTACAACGGACAGGAATACAATTCAGGGATGGCGTTGCAGCTTACTGCGCAGGGAAACAACGTTGTTTCACAAGTGCTGTTTATTGCCGATAGATTTGCTATTATCCGCAATGCTGCATCCGGCGCTTACACGCTTCCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAATAACGCGCTGATTCAGGATGGCTCGATTACCAACGCCAAGATCGGACAGTATATCCAGTCCAACAACTTCATTTCGGGCCAGCAGGGGTGGAGCATCAACAAATCCGGTGCGTCTGAATTCAATAACGTTGTCGTTCGTGGCGCGCTGTTTGCTGCGTCTGGTAACTTCGGATTTGATGGCGGAAACGGTGTGGTAATCAACGGTAACGGCGTCACCGTCAACCTTGACGGCGGCGGGCGAATTGTTTTAGGGAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
15e950da875892c62b92fea0c147d312c4f019606fcaf9028e13a6843da71f1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7666
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank