Protein

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Genbank accession
DBA55472.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MRSEALIVDSTQDGAGAQVNLVKKSVPISVMGSSSTPYMIAKWDLDKTLVGTAGVDQFFTMVIKYKFTKKTPACKILTYFDGQFSPGALDEGENVSVIYPNLRWGISIDSLRLYAISASGNGGDFGSLSVDWVCLYEGKLDNPPLSFMPSSSDLSPSIRWVGTSLQVNGMNPVNLKGEKGDIGTFSPEQSQMLEHHDATLSEHGVSISELKEKFGNLEPSILINSDTEYLSAIAAIEQAAQAKSGSVCSTIRLTNAGLPIILPCPELLMDREITIARVHEPLQACAMWSRAFYIHTNKSSSQVGIVTPGAMPFTNFVYRSSLPSFSGCKGYELSTSVTGSNKFRAISDIDCSQALSLTFRAIGTSRGVRWLLMDASVFDARVGVSDMERVWGAVSQVRGEEQWTAKMNGIVIPRNYITASNFTITDKMSRVTYNGSSRTVYMTVPSSLPDGFEFRIQNNSQNSILLQGASVVGGIRSLPRRSIYEVRKDNGSLIIYPILPNLDSSTGM
Physico‐chemical
properties
protein length:508 AA
molecular weight: 55277,30030 Da
isoelectric point:6,26948
aromaticity:0,08268
hydropathy:-0,07106

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
DBA55472.1
1 508
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0552
Central domain 11 228 219 0,3150
C-terminal 229 508 279 0,7353
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-228
C-terminal
229-508

Taxonomy

  Name Taxonomy ID Lineage
Phage Porphyromonas phage phage018a_AFR5B1
[NCBI] 		3154108 Uroviricota > Caudoviricetes > Nixviridae > Dewhirstvirus pging00L >
Host Porphyromonas gingivalis
[NCBI] 		837 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
4c35473e82ebfc642ec84dad698effbbca7187d2193c2b9f393ff158858945e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5713
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50