Protein

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Genbank accession
YP_009187665.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MALETIKIAELPSATQVVGDDYLVVEQPDKTKKATASQVISDLDLANKSSLTGPGGAGIIGTEDGEGVQKSLDTDRANTRELWRRALHDLGLTLVDGSFEEGATLTYTTDAIWHMSGAQCYTWSGTFPKSVPAGSTPSNTGSEWLTVGGLSLLDEVTEIKNEAVEAKDEAVEAKNQAEAYVLQASEFGNLYPNTAAGLAATTSGQYFQVPQGSGSSVSFKAYLNNAGVAQEVASMPGSAAIAKTLRTFATVADAQAQIADGNIPNQQNVLVKSSEYGYMSDEYINNNGTLELTGRRVPSQEVLKQLSEYIASLGTQGFCQKTLARKQVMFLV
Physico‐chemical
properties
protein length:332 AA
molecular weight: 35239,78780 Da
isoelectric point:4,60250
aromaticity:0,06928
hydropathy:-0,24066

Domains

Domains [InterPro]
DC_0079
ATT
3–40
DC_0079 G3DSA:2.10.10.80
IPR040775
RBD
95–141
IPR040775 Coil
IPR040775
RBD
97–141
IPR040775
DC_0547
STR
138–329
DC_0547
YP_009187665.1
1 332
Architecture
ATT
ATT
STR
ATT 3-40 | ATT 92-157 | STR 158-329 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009187665.1
1 332
Domain Start End Length (AA) Confidence
N-terminal 1 331 331 0,9974
Central domain 332 331 1 0,2970
C-terminal 332 332 0 0,0000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-331
Central
332-331
C-terminal
332-332

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_KB57
[NCBI] 		1719140 Uroviricota > Caudoviricetes > Vequintavirinae > Mydovirus KB57 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009187665.1 [NCBI]
Genbank nucleotide accession
NC_028659 [NCBI]
CDS location
range 36350 -> 37348
strand -
CDS
ATGGCCTTAGAAACAATTAAAATTGCGGAGTTACCCTCTGCAACCCAAGTGGTCGGAGACGACTACCTTGTTGTAGAACAACCGGATAAGACCAAAAAGGCCACCGCCTCTCAGGTTATCTCAGACCTTGACTTGGCAAATAAATCATCCTTGACAGGACCTGGTGGGGCTGGTATTATCGGCACAGAAGATGGCGAGGGAGTTCAGAAAAGTCTTGATACCGATCGCGCAAATACAAGAGAACTTTGGAGAAGAGCACTCCACGACCTTGGTTTGACACTTGTGGACGGTTCTTTTGAGGAAGGAGCGACCCTTACCTACACAACCGATGCTATTTGGCATATGTCGGGGGCACAATGTTACACTTGGTCGGGTACTTTTCCAAAATCTGTACCTGCTGGATCAACACCGTCCAATACAGGATCTGAATGGCTTACCGTTGGAGGGTTAAGCCTATTAGATGAAGTTACCGAGATAAAAAATGAGGCGGTAGAAGCAAAAGATGAGGCTGTTGAGGCCAAAAATCAAGCCGAGGCTTACGTACTTCAGGCTTCAGAATTTGGAAATCTATATCCAAACACTGCGGCTGGCCTTGCGGCAACAACTTCTGGACAATATTTCCAAGTCCCCCAAGGATCAGGAAGCTCTGTTTCTTTTAAAGCCTATCTTAATAACGCAGGGGTTGCACAAGAAGTTGCGAGTATGCCAGGCTCTGCTGCAATAGCCAAGACGCTTCGCACATTCGCAACGGTAGCCGATGCCCAAGCTCAGATAGCGGACGGGAATATCCCTAACCAACAGAATGTTCTTGTGAAAAGTTCTGAGTATGGATATATGTCTGATGAGTATATCAATAATAACGGAACATTGGAGCTGACTGGAAGGAGAGTCCCTTCTCAAGAGGTGCTGAAACAACTTTCGGAATATATTGCTTCCCTGGGTACTCAAGGATTTTGCCAGAAAACCTTAGCCCGGAAACAGGTTATGTTTTTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1cd3cbfe73edcc235ba163f0caced601c39bfff2a21710414e2a40c5248845b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8111
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumoniae bacteriophage vB_KpnM_KB57 Volozhantsev,N.V., Popova,A.V., Krasilnikova,V.M. and Bogun,A.G. 2017-09-14 — GenBank