Protein

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UniProt accession
A0A8S5NEB1 [UniProt]
Protein name
Right handed beta helix domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNTDEFRKLLTTREVRPQGPLTFTGQVDVGSTVEVLDFSGCSVHTPEFNDRTNLLIRNRGDKPLVIRGLRWTSDTKATNQHALLYAIDHNNLVLEDCELTGLNVGHFLDVRANTKAVGNITLRRCKFKASWARPDDTGRNPLTGGATGLEAVKFTGKVVRAENLPPLAHYKKYFNAGSLEFPVEAVIEDCTFEGGYYGLSGEGLSRSLIKGNRFLGQMRAISLQNCSGGNTVVWNDIKDNLSAAIHMAYGSSFNTVFWNTIKSVRAHGEGLIQAYVGSSGNLVWANDLEVTNLAQDTCKVYLYSGPDSSYNRFQANNLKGTCSRAYMALEEFWDPRTAARQSLAFNTPADNTGFTSRHVTGVEFIDNQLQASTPSTMELYRGPAWQAN
Physico‐chemical
properties
protein length:388 AA
molecular weight: 42827,52740 Da
isoelectric point:7,07568
aromaticity:0,09536
hydropathy:-0,35799

Domains

Domains [InterPro]
IPR012334
STR
14–330
IPR012334
IPR011050
STR
45–286
IPR011050
IPR011050
STR
45–290
IPR011050
IPR039448
ENZ
184–283
IPR039448
A0A8S5NEB1
1 388
Architecture
STR
STR 14-330 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5NEB1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,1145
Central domain 30 333 305 0,9716
C-terminal 334 388 54 0,5407
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-333
C-terminal
334-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudovirales sp. ctSxd6
[NCBI] 		2826774 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD92602.1 [NCBI]
Genbank nucleotide accession
BK015140 [NCBI]
CDS location
range 16217 -> 17383
strand +
CDS
ATGAACACTGATGAGTTCCGGAAGCTCCTGACCACCCGGGAGGTCCGGCCCCAGGGCCCACTGACCTTCACAGGCCAGGTGGACGTGGGCAGCACAGTGGAGGTCTTGGACTTCTCTGGCTGCTCCGTCCACACCCCGGAGTTCAACGACAGGACCAACCTCCTGATCCGGAACCGGGGAGACAAGCCCCTGGTCATTCGTGGGCTCCGATGGACCTCTGACACCAAGGCAACCAACCAGCACGCCCTGCTCTATGCCATCGACCACAACAACCTGGTCCTGGAGGACTGTGAGCTGACCGGGCTGAATGTGGGGCACTTCCTGGATGTCCGGGCCAACACCAAGGCCGTGGGGAACATCACCCTGCGGCGTTGCAAGTTCAAGGCCTCCTGGGCCCGACCTGACGACACGGGGAGGAATCCCCTGACCGGAGGGGCCACAGGCCTGGAGGCTGTGAAGTTCACGGGCAAGGTGGTCAGGGCTGAGAATCTCCCTCCCCTGGCCCACTACAAGAAGTACTTCAATGCCGGCTCCCTGGAGTTCCCCGTGGAAGCCGTCATTGAGGACTGCACCTTCGAGGGTGGCTACTATGGCCTGTCCGGCGAGGGGCTGTCCCGCTCCCTGATCAAGGGGAATCGCTTCCTGGGGCAGATGAGGGCCATCAGCCTCCAGAACTGCTCCGGGGGCAACACGGTGGTCTGGAACGACATCAAGGACAACCTGTCAGCTGCCATCCACATGGCCTATGGGTCCTCCTTCAACACCGTCTTCTGGAACACCATCAAGTCCGTGAGGGCACACGGGGAGGGCCTGATCCAGGCCTACGTGGGCTCCTCTGGCAACCTGGTCTGGGCCAATGACCTGGAGGTCACAAACCTGGCCCAGGACACCTGCAAGGTCTACCTCTACAGTGGCCCTGACAGCTCCTACAACCGCTTCCAGGCCAACAACCTGAAGGGAACCTGTTCCAGGGCCTACATGGCCCTGGAAGAGTTCTGGGACCCCAGGACGGCTGCAAGGCAGTCCCTTGCTTTCAACACCCCAGCCGATAACACCGGCTTCACCTCCCGCCACGTCACTGGTGTGGAGTTCATCGACAACCAGCTCCAAGCATCCACACCCAGCACCATGGAGCTTTACCGAGGACCAGCATGGCAGGCAAACTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
43384da53de3f961b6e9c02a81e3f5d58b946bcb7ab52bf80b177e0a53b5b4a3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8572
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50