Protein

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Genbank accession
AAZ03642.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGFFAGKYSDGKTVLSLNKVNGGDINAHKTPNANTIFHSDMPFVLVESTYESALSNAGNGFFVCQMPSVIANLKSNDPGRVILTAVEINGTHRGFLNGTQSQVGQFLAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYTYSSSLGHEESIARQGTGGTISQASGFNLYRPGRAYAAKAMGRAWTLAGFPAGASKVSINSGNVDFWHPNWQAPIGAGKRGHTWFYVCNSNIRGYAGKKGTTPSNVSVLYNSSTYPDKVYVCRGSTSNLASQAAKKQYVQDSYNITPTKVIWYVLNLRYSNGGMSVASNPFTGSDIRISPSNFTIKGVSLPNTSYKFINQNAFGNLGYRPDMEYIGNNVAYTGVFGDTTARCEIVGSNKGSLWSPVNYGGSKSQISIYKFSAGKQWYVNSNNNTIGNEHGVVWGPSSVPLRLLPNNVASTYIGDDINPSYPGTGNKYVALSTVSLGLPNANSTVILTTEVVAGNLNTAGGPIRTYGGTAWQVQGRRQQSYTGGDGIFHQILTLPPNHLVPFHTTASYSYTQRWASRPDDLTFRRSGFIYTIKNLGNGNAELGVVIHANESAAVFLPRLRVTIQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63908,62140 Da
isoelectric point:9,55713
aromaticity:0,11092
hydropathy:-0,25899

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
AAZ03642.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAZ03642.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,0032
Central domain 12 210 200 0,0980
C-terminal 211 595 384 0,9885
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Bf23
[NCBI] 		10707 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus >
Host Escherichia coli BW25113
[NCBI] 		679895 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAZ03642.1 [NCBI]
Genbank nucleotide accession
DQ097178 [NCBI]
CDS location
range 75 -> 1862
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGTGATGGTAAAACTGTATTATCACTAAACAAGGTGAATGGTGGGGATATTAATGCTCACAAAACTCCTAACGCCAATACTATATTTCATTCTGATATGCCATTTGTTCTAGTCGAGAGTACATATGAGAGTGCGTTAAGTAACGCGGGTAATGGGTTCTTTGTATGCCAAATGCCTTCTGTAATAGCTAATCTAAAGAGCAATGATCCTGGTAGAGTTATACTAACCGCTGTTGAAATTAATGGTACTCATCGTGGTTTTTTGAATGGTACTCAATCCCAAGTTGGACAATTTCTTGCATTTTTTGAAGACCCCCCTATTGGTAGGGCTGGTGCTGAAGTAGGTCTTACATCAGCTTTTGCATCTGGTAATAGTTTAGCACATGGTACCTATACGTATAGCTCTAGTCTAGGCCATGAGGAGTCAATAGCTAGACAAGGTACTGGTGGTACTATATCACAGGCTTCTGGGTTTAACTTATACAGACCAGGAAGGGCGTACGCTGCTAAAGCTATGGGCAGAGCGTGGACTTTAGCAGGATTTCCAGCCGGAGCATCTAAAGTATCGATAAATAGTGGTAATGTTGACTTCTGGCACCCTAACTGGCAGGCTCCTATAGGGGCGGGGAAAAGGGGGCATACTTGGTTTTATGTTTGTAACTCCAATATACGTGGATACGCTGGTAAAAAAGGTACTACGCCAAGTAATGTTAGTGTACTATACAACTCTTCAACCTACCCAGATAAGGTTTATGTATGTAGAGGCTCAACATCTAACTTAGCATCACAAGCAGCAAAGAAGCAGTATGTGCAGGATAGTTATAATATTACTCCAACCAAAGTTATCTGGTATGTGCTGAATCTTAGGTACTCTAATGGTGGTATGAGCGTTGCTAGTAATCCATTTACTGGATCCGATATTCGTATAAGCCCCTCTAACTTTACTATAAAAGGTGTTAGTCTTCCAAATACTAGCTACAAATTTATTAATCAGAATGCTTTTGGTAACTTAGGGTATAGGCCTGATATGGAATATATTGGAAATAACGTTGCTTATACTGGAGTATTTGGAGATACTACAGCAAGATGCGAAATTGTGGGGTCTAATAAGGGGTCTCTATGGTCTCCCGTAAATTATGGGGGTTCTAAGTCTCAGATAAGTATTTACAAGTTCTCCGCCGGTAAACAATGGTACGTTAATTCCAACAATAATACTATAGGTAATGAGCACGGGGTTGTTTGGGGACCTTCGTCAGTGCCTTTACGATTACTACCAAATAACGTAGCCAGTACTTACATAGGCGATGATATAAACCCTTCTTACCCGGGTACAGGTAATAAGTATGTAGCCTTATCCACAGTAAGTCTTGGGCTACCAAATGCAAACTCTACAGTAATCCTAACTACTGAGGTGGTTGCTGGAAATCTTAATACAGCAGGAGGTCCTATACGAACATATGGTGGCACTGCATGGCAAGTGCAGGGGAGAAGGCAGCAAAGTTATACAGGAGGTGATGGGATATTTCATCAAATATTAACCCTACCTCCTAACCATTTGGTGCCATTTCATACTACAGCTTCCTATAGTTATACACAACGGTGGGCTAGCCGACCAGATGATTTAACATTTCGTAGAAGTGGGTTTATTTATACTATTAAAAATCTGGGTAATGGTAATGCTGAGCTAGGTGTGGTTATACATGCAAATGAATCCGCCGCCGTCTTCTTACCTAGATTAAGAGTAACAATTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6ebaaa18a86e913ac55837840f7a4d599de2d8a10956ee54faf1496ae3f1ac24
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2521
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The DNA region of phage BF23 encoding receptor binding protein and receptor blocking lipoprotein lacks homology to the corresponding region of closely related phage T5 Mondigler,M., Ayoub,A.T. and Heller,K.J. 2006 16598825 GenBank