Protein

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Genbank accession
WVO01527.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFTRMLNYGNIAEDSKIVKIQFSTASWMILLSNGELHGRGNGAFGDGQAKVWHEDWTLIRNNVKNFWMDQFGNSLMLQETNNKVYYTGSRFYRTSNDNTMETTFKEDIFFSSGSIIIDTVSFNTGSPSIGFIDNNNFFRVIGSQRGLNSSTVPYTNWNLVSTNIIAIGNSGTNWWTINTSGQVHGGGQNIASIFSSAPESTFYSYPVLIGNASTDEIYGKSLQDHQYAIIFPSYVDKTWYGRGFGFNGVFGNGSTNNLTSTTIISNSWPMRTSIIGLADNSFSNCNTTMYYTNEGMYVTGNTSFRGLNDGTVRVSPVKVQVPFNTNDIVYLDLGNSATYVYLKDGSIYMCGRFNTKTEIITYDTYTNISDKFGKFPKDLTKESMKHGLNVNQGDIK
Physico‐chemical
properties
protein length:398 AA
molecular weight: 44432,94410 Da
isoelectric point:6,21855
aromaticity:0,13568
hydropathy:-0,33719

Domains

Domains [InterPro]
DC_0433
ATT
1–135
DC_0433 IPR009091
IPR009091
STR
15–270
IPR009091 IPR009091
IPR009091
STR
284–370
IPR009091
WVO01527.1
1 398
Architecture
ATT
STR
ATT 1-135 | STR 136-371 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01527.1
1 398
Domain Start End Length (AA) Confidence
N-terminal 1 202 202 0,1113
Central domain 203 387 186 0,4863
C-terminal 388 398 10 0,7926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-202
Central
203-387
C-terminal
388-398

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01527.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 46852 -> 48048
strand -
CDS
ATGATACCGTTCACAAGAATGTTAAATTATGGCAATATAGCGGAAGATTCTAAGATTGTTAAAATACAATTCAGTACAGCATCTTGGATGATTTTATTAAGTAATGGGGAATTGCATGGTAGAGGCAATGGTGCTTTTGGTGATGGTCAAGCAAAAGTATGGCATGAAGATTGGACACTTATAAGAAATAACGTAAAAAATTTCTGGATGGATCAATTTGGGAACTCTTTGATGCTTCAAGAAACTAATAATAAAGTCTATTATACGGGTTCTAGATTTTATCGTACTAGTAATGACAATACAATGGAAACAACTTTCAAAGAAGATATTTTCTTTTCTTCAGGCTCTATTATTATTGATACAGTTTCATTTAATACAGGTTCCCCTAGTATTGGTTTCATAGATAATAATAATTTTTTCAGAGTGATTGGTTCACAAAGGGGTTTAAACTCTAGTACAGTGCCATATACAAATTGGAATTTAGTAAGTACAAATATTATAGCTATAGGTAATAGTGGTACAAACTGGTGGACAATTAATACATCGGGTCAAGTACATGGTGGTGGTCAAAATATAGCTAGTATATTTTCATCAGCCCCTGAAAGTACTTTTTATTCATATCCAGTATTAATTGGAAATGCTAGTACTGATGAGATATATGGTAAATCACTACAGGATCATCAATATGCAATAATTTTTCCTTCTTATGTTGATAAAACGTGGTATGGAAGAGGATTTGGTTTTAATGGTGTATTTGGTAATGGTTCTACTAATAATCTAACATCAACCACTATAATAAGTAATTCATGGCCTATGAGAACCAGTATTATAGGTCTTGCTGATAATTCATTTTCAAACTGTAATACAACTATGTATTACACAAATGAAGGTATGTATGTTACCGGAAATACTTCATTTAGAGGATTAAATGATGGAACCGTTAGAGTGTCTCCAGTAAAAGTTCAAGTTCCATTTAATACTAATGATATTGTGTATCTTGATTTAGGTAACTCAGCAACTTATGTATACTTGAAAGATGGTTCAATATATATGTGTGGTAGATTTAATACTAAAACAGAAATAATTACATATGATACTTATACTAATATATCAGACAAATTTGGTAAATTCCCAAAAGATTTAACGAAAGAATCAATGAAACATGGATTGAATGTAAATCAAGGAGATATAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
06a8d4c2b88d4f5be8fd0e30d6c02a5cf033a07c70015feda7f1bd8cff82c16b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7667
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank