Protein

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Genbank accession
URC22638.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MARPSVPIEVWAQQDIELPVAHTPNKRRPINDLWDKGYDKGQRPSVQAWNYMWNMQTDWIRYLADEAMPGLDDKYLKKDLNFSDVPNKVVARNNLGVYSKAEADAAFVDIKGDTMTGALTTPRVNFNAASSDYAYIEASSPAADKTFFDFTLGDNFGDKNATGVDVMRFRFIPAGTGGPGSGVPFSMVELHADSATSAWMEVTGTVWARKLISNGDIVAGNGSVASATMWTNGQADFAQLNSRSNITVQHSGRTAYYQENGDVSGAIWGDGTNNGSLKAYIDNRATTSASLGQERGWFKDEKTGYIHQWAVGQWKGWNDESFDSISWPIPFPAECLTVMVGIQLERETNRADGFGQVAAWDRNGCRACVQWPGTGASWEVGQRTIVWAVGR
Physico‐chemical
properties
protein length:391 AA
molecular weight: 43000,23970 Da
isoelectric point:5,07813
aromaticity:0,11253
hydropathy:-0,44731

Domains

Domains [InterPro]
DC_0413
STR
1–352
DC_0413
G3DSA:2.60.40.3940
RBD
290–390
G3DSA:2.60.40.3940
IPR054075
RBD
302–374
IPR054075
URC22638.1
1 391
Architecture
STR
RBD
STR 1-352 | RBD 353-390 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM-Kashira
[NCBI] 		2943834 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URC22638.1 [NCBI]
Genbank nucleotide accession
ON287374.1 [NCBI]
CDS location
range 21074 -> 22249
strand -
CDS
ATGGCACGTCCATCGGTCCCAATTGAAGTTTGGGCACAACAAGATATCGAACTTCCTGTAGCTCACACACCAAACAAGCGTCGCCCGATCAATGACCTGTGGGACAAGGGTTATGACAAAGGTCAGCGCCCATCTGTTCAGGCATGGAACTATATGTGGAACATGCAGACAGATTGGATCCGTTACCTTGCAGATGAAGCAATGCCGGGCCTTGACGACAAGTACCTTAAAAAGGATCTGAACTTCTCTGACGTTCCAAACAAGGTTGTCGCCAGAAACAACCTCGGGGTGTACAGCAAAGCAGAGGCTGATGCCGCATTCGTTGACATCAAGGGTGACACCATGACTGGTGCATTGACAACCCCACGTGTCAACTTCAATGCTGCTTCGTCAGATTATGCCTACATCGAGGCTTCAAGTCCAGCGGCAGATAAGACTTTCTTCGACTTCACCCTCGGCGACAATTTTGGTGACAAGAATGCCACCGGCGTTGACGTGATGCGATTCAGGTTTATCCCTGCTGGAACTGGCGGCCCGGGATCCGGTGTACCATTCTCGATGGTTGAACTGCACGCCGACTCCGCAACATCTGCTTGGATGGAAGTTACCGGCACAGTCTGGGCACGCAAGCTCATCTCCAACGGAGACATCGTTGCAGGTAACGGTTCTGTAGCTTCAGCCACCATGTGGACCAACGGTCAGGCAGACTTTGCCCAGCTTAATTCCCGTTCAAACATCACTGTACAACACAGTGGCAGAACTGCATATTACCAAGAGAATGGAGACGTCTCTGGGGCGATCTGGGGCGATGGGACAAACAATGGAAGTCTGAAGGCTTACATCGACAACAGAGCCACAACCTCAGCCAGTTTGGGACAAGAGCGAGGATGGTTCAAAGATGAGAAGACTGGATACATCCACCAGTGGGCTGTTGGTCAATGGAAAGGATGGAACGATGAATCGTTCGATAGCATCTCATGGCCGATCCCCTTCCCAGCTGAATGTCTTACCGTAATGGTAGGGATCCAGCTCGAGAGGGAGACTAACCGAGCAGACGGGTTTGGTCAAGTTGCAGCGTGGGACCGTAACGGATGCCGCGCCTGTGTTCAATGGCCGGGTACCGGTGCTTCTTGGGAAGTAGGACAGAGAACCATCGTCTGGGCCGTTGGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
24c8aa8a801bcb32192322e17dba28ba844f2f301a9228bd8d2e6690dd32818f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6751
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50