Protein

View in Explore
Genbank accession
QVJ12755.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,66
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNISQAVTVTAAQLNAVADTTQYVKPGMVIMWAGSLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGSSQAVGTRGGSANIVWDGFTEGTALTLAQIPSHTHTWRTRGATTLTGSAGDSGALTGGSGKAANTNLETGPAGQGQTHNHAVKINIPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22164,78710 Da
isoelectric point:8,64297
aromaticity:0,06512
hydropathy:0,01023

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA13
[NCBI] 		2833431 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12755.1 [NCBI]
Genbank nucleotide accession
MZ089732.1 [NCBI]
CDS location
range 2133 -> 2780
strand -
CDS
ATGGGTCTTGAGGTCGCAACTTATATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCACCTGCGACTCATTAAGAGTGCTATTAAGAATACCTTCCCCAATATTTCTCAGGCTGTCACTGTAACGGCAGCCCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAACCTGGGATGGTTATCATGTGGGCTGGTTCACTGGCTCAGATCCCAGCAGGTTGGAAGCTTTGTAATGGTGTAGGGACTACCTCTAATGGTATCCCAGTCCCCAACCTCATTGGTGCATTCCCCTGGGGTATCGACGGATCTTCCCAGGCTGTAGGTACTAGAGGCGGTAGCGCTAACATTGTATGGGATGGGTTCACTGAAGGGACTGCCCTTACCCTAGCCCAAATCCCATCACACACCCACACTTGGAGAACTAGGGGTGCTACTACCCTCACCGGTTCTGCGGGTGACTCGGGTGCTCTGACGGGAGGCTCTGGTAAAGCAGCCAATACCAACCTTGAGACTGGTCCTGCTGGTCAAGGTCAGACTCACAACCATGCAGTAAAGATCAACATTCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
be05a2536d31f79c2b54784112daa4b14c5fbd2839736dd4645087fa08275949
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7508
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank