Protein

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Genbank accession
YP_010092406.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MATLKPIQFKRSKTAGSRPLPEQVLEGELALNLEDRMIFTKDDEGNIIDLGFAKGGRVDGDIVQVGNYTQTGNYTTSGDITAKNINASVGINAAGEVRSSTGVFRTRAREGQNAHLWFEGEEVGEGQNFERGVLYASSQTATSGSIKLRVMNGFDNNKAQALFGFDGSGDITAPRDLVSQRGRFSIEAVAPTINTTRIYTRDKPWRSNSDESYGWLDLVNYVPGENGALALNYVYKGRAMAGGTIWHQLVDERTGPEWALYTGSGPENKAFAVGSSAGKGLGNFTGSLHVGNPGYSAIGNNSITIGETNTGLRQTSAGNLDFLSANNMAFRFSAGEAINRSYNRLHVQHSDANGIAVNPPANNAQLQVNTSGDENNAGGNGLTLIGYYAGATGEYNHYFRGKGSASFDMHRGVNINQGGLNVYNGLTNVGQINLTGSMNTTNVPQGTYKWDDLNTVAADAKSYLRRFRSRNNSTIWHETVEGGIWRLSTGSTDAQEEFTISTAGQATFRGEVISRYANGFRIAYGDYGFFIRNDGSNTYFMLTNSGDQYGGWNTFRPFTISNGTGRVSMGNGAGISGGLTVSPGIESEYVKTYTGSIGHGSWASQNDNEAMIFQRITSASSSEYCPIVKQKYIGGNRTWSIGTLISTGSFHIHMKDSAGNDRNFAFQPNGDFNTSGTINTSVISASSARFSSIATPGGGQFANDGNVYINKSGFAGWIDALFVKVNGSNAMAGTLTMSNGQIQLAGGNGNIGFQKAGTNPRNMRIFIAGDASRGNRIELADDASYLVYFERHPTSGIQLMMNGNGNFNNVYIRSDARLKRNFKPIENALDKVDALNGLIYEKADKIGGEYSTVEAGLIAQDLQKVLPEAVKSVSMDGDDEVLTVSSQATIALLVNAIKELKARVEELESK
Physico‐chemical
properties
protein length:910 AA
molecular weight: 97779,82220 Da
isoelectric point:6,13846
aromaticity:0,09341
hydropathy:-0,41462

Domains

Domains [InterPro]
DC_0538
STR
1–703
DC_0538 IPR030392
IPR048390
ATT
462–560
IPR048390 DC_0482
IPR030392
CHP
814–871
IPR030392 Coil
YP_010092406.1
1 910
Architecture
STR
ATT
STR
RBD
STR 1-461 | ATT 462-560 | STR 561-703 | RBD 704-910
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010092406.1
1 910
Domain Start End Length (AA) Confidence
N-terminal 1 76 76 0,7616
Central domain 77 282 207 0,4125
C-terminal 283 910 627 0,8428
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-76
Central
77-282
C-terminal
283-910

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage X20
[NCBI] 		2006942 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Winklervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010092406.1 [NCBI]
Genbank nucleotide accession
NC_055728 [NCBI]
CDS location
range 159440 -> 162172
strand +
CDS
ATGGCAACTTTAAAACCTATTCAATTTAAAAGAAGTAAAACAGCAGGTTCAAGACCTTTGCCTGAACAAGTATTAGAAGGCGAATTAGCACTGAACCTCGAAGATCGTATGATTTTCACTAAAGACGACGAAGGGAATATTATTGACCTTGGTTTTGCAAAAGGTGGTCGTGTAGATGGTGATATTGTTCAGGTTGGTAATTACACCCAAACCGGCAACTACACTACTTCAGGCGATATTACCGCTAAAAATATAAACGCTTCTGTAGGAATTAATGCAGCGGGTGAAGTTCGTTCTAGTACTGGTGTATTCCGCACTAGAGCTAGAGAAGGACAAAATGCCCACTTGTGGTTTGAAGGCGAAGAAGTTGGAGAAGGACAAAATTTTGAACGAGGTGTTCTTTATGCTTCTTCTCAAACTGCAACTTCTGGCTCTATCAAGCTTCGTGTAATGAACGGGTTCGACAATAATAAAGCGCAAGCTTTATTCGGCTTCGATGGGTCTGGTGATATTACCGCTCCAAGAGATTTAGTATCTCAACGTGGACGCTTTTCTATCGAAGCTGTGGCCCCTACAATTAATACAACTCGTATTTACACAAGAGATAAACCTTGGCGGTCAAATAGTGATGAATCTTATGGGTGGTTAGATTTAGTTAATTATGTTCCTGGAGAAAACGGGGCACTAGCATTAAACTATGTCTATAAAGGTCGCGCCATGGCTGGTGGGACTATTTGGCATCAATTGGTTGATGAAAGAACAGGTCCTGAATGGGCTCTTTATACTGGTAGCGGTCCTGAAAATAAAGCTTTTGCAGTAGGGTCATCCGCAGGTAAAGGCCTCGGTAACTTCACAGGCAGTTTACATGTAGGTAATCCAGGATATTCTGCTATTGGTAATAATTCTATTACTATTGGTGAAACTAATACTGGTTTAAGACAAACTTCAGCAGGTAATTTAGATTTCTTATCGGCTAATAATATGGCTTTCAGATTTTCTGCAGGCGAAGCTATAAACCGTTCTTATAATCGATTACACGTCCAGCATTCTGATGCTAATGGTATTGCTGTTAATCCGCCAGCTAATAATGCTCAACTACAAGTAAATACTTCAGGTGATGAAAATAACGCAGGCGGAAATGGATTAACCTTAATAGGCTATTATGCTGGAGCCACTGGCGAATACAATCACTATTTCCGTGGTAAAGGTTCTGCATCTTTTGATATGCATCGTGGTGTAAACATTAACCAAGGTGGCCTTAATGTCTATAATGGGTTAACGAATGTAGGTCAAATTAATTTAACAGGTTCAATGAATACTACTAACGTTCCACAAGGGACTTATAAGTGGGATGATTTGAACACTGTAGCTGCTGACGCTAAATCTTATTTACGTAGATTCCGTTCAAGAAATAACTCAACGATTTGGCATGAAACAGTCGAAGGTGGAATTTGGCGTTTATCTACTGGTTCTACTGACGCTCAAGAAGAGTTTACTATTAGTACTGCTGGCCAGGCTACATTTAGAGGCGAAGTTATTAGTCGCTATGCTAATGGATTTAGAATTGCTTATGGTGATTACGGATTCTTTATTCGTAATGATGGTTCCAACACTTATTTTATGTTGACTAATTCAGGAGACCAATACGGTGGATGGAATACTTTCCGTCCTTTTACTATCAGTAATGGTACTGGCCGAGTTTCAATGGGTAATGGTGCTGGTATTAGTGGTGGACTGACGGTTTCTCCAGGCATTGAATCGGAATATGTTAAAACTTATACAGGTAGTATAGGTCATGGCTCTTGGGCTTCACAGAATGATAATGAAGCAATGATTTTCCAAAGAATCACTAGTGCTTCTAGTTCTGAATATTGCCCTATCGTTAAACAAAAATATATAGGCGGAAATAGAACTTGGTCAATAGGTACTTTGATTAGCACAGGTTCTTTCCACATCCATATGAAAGATTCTGCAGGTAATGATAGAAACTTTGCTTTTCAACCTAACGGCGACTTCAATACTTCAGGTACTATCAATACTTCTGTTATATCTGCAAGTAGCGCCAGGTTTAGTTCTATCGCTACTCCAGGTGGTGGTCAATTTGCTAATGACGGTAACGTTTATATCAATAAATCTGGTTTTGCAGGTTGGATAGATGCGCTATTTGTTAAAGTGAATGGCTCGAACGCTATGGCAGGCACTTTGACCATGAGCAATGGTCAAATTCAGTTAGCAGGTGGTAATGGCAATATAGGGTTCCAGAAAGCAGGCACAAACCCTCGTAATATGAGGATATTCATAGCTGGTGATGCTTCTCGTGGTAACCGTATTGAATTAGCTGACGATGCTTCATATCTTGTTTATTTCGAACGTCATCCTACTTCAGGCATTCAATTGATGATGAACGGTAACGGTAACTTTAATAACGTTTATATCCGTTCAGATGCTAGATTGAAACGCAATTTCAAACCAATAGAAAATGCTTTAGATAAAGTGGATGCTTTAAATGGTCTTATTTATGAAAAAGCAGATAAAATTGGTGGTGAATATTCTACTGTAGAAGCTGGCTTAATAGCTCAAGACCTTCAGAAAGTCCTCCCAGAAGCAGTTAAATCTGTTTCTATGGACGGCGACGATGAAGTATTAACCGTTTCTTCACAAGCAACTATTGCTTTGTTAGTTAATGCTATCAAAGAACTTAAAGCTCGTGTTGAAGAACTTGAATCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
45154f1654b97995556bf94680de6b8750830213603657a154c3b9028809d959
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Environmental T4-family bacteriophages evolve to escape abortive infection via multiple routes in a bacterial host employing #altruistic suicide# through Type III toxin-antitoxin systems Chen,B., Akusobi,C., Fang,X. and Salmond,G.P.C. — — GenBank