Protein

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Genbank accession
QQV88860.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLTRIQFKRSKTPNVRPAPDTVAEGEIVLNLADRAILTKLGNEIIDLGFAKGGKVDGNIDLTGNFTQTNGHFNTTGSITAGAESSFTDINVLNSIKLKSKTTEDFGSITFYDGKFYFEQYINGKWTGQLGIPQGAGTIASREWTNTMIKDLGSGVSMSSPRGTTEIANNDDGNMGFWDRTTKRWVFVVGAQSGANFAGGYVRIKNALSGGDQSSFEATSPDGGKKIGLWAYNDGRTLLSAYDGGAWSNITIGGVGNGTIALREWVSNLNQTYNETMNLKAGSGSSSPITLRNWGSGDRKNVFEVGDNLSYFFYAQRKGNNTIEFNVNGPILTNGQSVATQQWVQNNAGGMATINVVYPVGVVMWFAQNKNPNSLFPGTKWVYVGENKTIRLANSNGSNVMSSGGNDNVALSAGHMPSHTHSFSGTTSWFDYGSKGTSGGGAHDHGVPYSVGHNNNLHIANIDQSSFKGESKPLSLNGLRNVEYKLRTDSNGNHSHSVAIGGHNHTISGTTGGAGSGSAFSVVNSYVMLMAWYRES
Physico‐chemical
properties
protein length:537 AA
molecular weight: 57387,67190 Da
isoelectric point:8,43061
aromaticity:0,09683
hydropathy:-0,41639

Domains

Domains [InterPro]
DC_0033
STR
1–537
DC_0033
IPR053827
ATT
355–535
IPR053827
QQV88860.1
1 537
Architecture
STR
ATT
STR 1-354 | ATT 355-537
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV88860.1
1 537
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,3793
Central domain 147 345 200 0,2488
C-terminal 346 537 191 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-537

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTRCR_121
[NCBI] 		2801527 No lineage information
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV88860.1 [NCBI]
Genbank nucleotide accession
MW385300.1 [NCBI]
CDS location
range 457 -> 2070
strand +
CDS
ATGGCTGACTTAACACGAATTCAATTTAAACGATCAAAAACACCTAATGTTAGACCTGCGCCAGACACAGTTGCAGAAGGTGAAATTGTTCTTAACTTAGCTGATCGTGCTATTTTAACAAAGTTAGGAAATGAAATTATTGACCTTGGTTTTGCTAAAGGTGGTAAAGTTGATGGTAATATTGATCTTACTGGTAACTTTACTCAAACTAATGGACATTTCAATACAACAGGTTCTATTACTGCAGGAGCCGAATCCTCTTTTACTGATATTAATGTGTTGAATTCTATTAAATTAAAAAGTAAAACTACTGAGGATTTTGGATCAATAACGTTTTATGACGGTAAATTTTATTTTGAACAATATATTAATGGTAAATGGACTGGACAGTTAGGAATACCTCAGGGTGCGGGTACTATTGCTTCCAGAGAATGGACTAATACTATGATCAAAGATCTTGGCAGTGGTGTTAGTATGTCTAGTCCAAGAGGAACAACCGAAATAGCAAATAATGATGATGGAAATATGGGTTTTTGGGATAGGACAACTAAACGTTGGGTGTTTGTCGTTGGGGCACAATCAGGAGCTAACTTCGCAGGAGGTTACGTAAGGATTAAGAACGCACTATCCGGCGGCGACCAGTCATCTTTTGAAGCCACTTCTCCTGATGGTGGTAAGAAGATCGGTCTATGGGCGTATAATGATGGGCGTACACTTTTATCTGCTTATGACGGTGGTGCTTGGTCTAATATCACAATTGGTGGCGTTGGTAATGGTACAATTGCATTACGTGAGTGGGTTTCAAATTTAAACCAAACATACAATGAGACCATGAATTTAAAAGCAGGTAGTGGTTCTAGTTCACCAATTACATTGCGAAATTGGGGTTCAGGTGATAGAAAAAACGTATTTGAAGTTGGTGATAACCTTAGTTATTTCTTTTATGCTCAACGCAAAGGAAATAATACAATTGAATTTAATGTGAATGGTCCTATATTGACCAATGGTCAATCTGTTGCAACTCAACAATGGGTACAAAATAATGCTGGTGGGATGGCAACAATTAATGTTGTATATCCTGTTGGTGTTGTTATGTGGTTCGCCCAAAATAAAAACCCAAATAGCTTGTTCCCAGGAACAAAATGGGTTTATGTTGGCGAAAATAAAACAATTCGTTTAGCTAATAGTAACGGTAGTAATGTTATGTCATCTGGTGGTAATGATAATGTTGCTTTATCTGCTGGACATATGCCATCGCATACTCACTCATTTTCTGGTACAACTTCATGGTTTGATTATGGGTCTAAAGGTACTTCAGGTGGTGGTGCCCATGATCATGGTGTTCCTTATTCTGTTGGTCACAACAACAACCTCCATATCGCAAACATTGACCAGTCCAGTTTTAAAGGAGAGAGTAAACCATTAAGCCTTAATGGTTTACGAAATGTTGAATATAAACTGAGAACTGATAGTAACGGTAACCATTCGCATAGTGTTGCAATTGGTGGTCACAACCATACGATTAGCGGTACTACAGGCGGTGCTGGTAGTGGATCTGCGTTTAGCGTAGTCAACTCATATGTCATGTTAATGGCTTGGTATAGAGAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37a68b233b3beed2b5e77c59a66a6bf603dbe840bd5e2d291ea672d06665174d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50